CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART12G09480
(
Oryza barthii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OBART12G09480
T255011_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART12G09480.1
MADS box
13
60
HIDNKERRQVTFTKRRGGLFKKASELALLAGASIAVVVFSETNLAYAF
Links
Other
MADS box
family TFs
Other
Oryza barthii
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM12G10670
Oryza glumaepatula
OGLUM12G10670
N
1.000
ONIVA12G01620
Oryza nivara
ONIVA12G01620
N
1.000
ORGLA12G0089800
Oryza glaberrima
ORGLA12G0089800
N
1.000
ORUFI12G10530
Oryza rufipogon
ORUFI12G10530
N
1.000
BGIOSGA036334
Oryza indica
BGIOSGA036334
N
0.938
OLONG_012662
Oryza longistaminata
OLONG_012662
N
0.938
OPUNC12G08600
Oryza punctata
OPUNC12G08600
N
0.875
BGIOSGA006672
Oryza indica
BGIOSGA006672
N
0.833
BGIOSGA018453
Oryza indica
BGIOSGA018453
N
0.833
OBART12G09450
Oryza barthii
OBART12G09450
N
0.833
OGLUM12G10680
Oryza glumaepatula
OGLUM12G10680
N
0.833
ONIVA12G01580
Oryza nivara
ONIVA12G01580
N
0.833
ORGLA12G0089600
Oryza glaberrima
ORGLA12G0089600
N
0.833
ORUFI12G10490
Oryza rufipogon
ORUFI12G10490
N
0.833
OS12G0407000
Oryza sativa
OS12G0407000
N
0.833
OLONG_012664
Oryza longistaminata
OLONG_012664
N
0.792
OPUNC12G08610
Oryza punctata
OPUNC12G08610
N
0.771
OPUNC06G14680
Oryza punctata
OPUNC06G14680
N
0.729
OMERI06G17180
Oryza meridionalis
OMERI06G17180
N
0.708