CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OMERI01G38510
(
Oryza meridionalis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OMERI01G38510
T255160_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI01G38510.1
MADS box
10
58
LIANPQTRATTYKKRKAGLIKKAGELATLCDIPVAVVCAGPDGGAPTVW
Links
Other
MADS box
family TFs
Other
Oryza meridionalis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA000269
Oryza indica
BGIOSGA000269
N
1.000
OBART01G41560
Oryza barthii
OBART01G41560
N
1.000
OLONG_001193
Oryza longistaminata
OLONG_001193
N
1.000
ONIVA01G46660
Oryza nivara
ONIVA01G46660
N
1.000
ORGLA01G0355000
Oryza glaberrima
ORGLA01G0355000
N
1.000
ORUFI01G44910
Oryza rufipogon
ORUFI01G44910
N
1.000
OGLUM01G45730
Oryza glumaepatula
OGLUM01G45730
N
0.979
OPUNC01G40380
Oryza punctata
OPUNC01G40380
N
0.958
OB01G50150
Oryza brachyantha
OB01G50150
N
0.708