PGSC0003DMG400019525 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400019525 T255628_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400050265 MADS box 10 56

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.917
mgf000945m Mimulus guttatus mgf000945m I 0.792
mgf004425m Mimulus guttatus mgf004425m I 0.792
TCM_014051 Theobroma cacao TCM_014051 I 0.766
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.750
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.750
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.750
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.745
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.739
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.729
30138.m004061 Ricinus communis 30138.m004061 I 0.729
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.729
PK21701.1 Cannabis sativa PK21701.1 I 0.729
Bra025685 Brassica rapa Bra025685 I 0.723
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.723
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.717
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.708
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.708
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.708
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.702
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.702
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.702