CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400038539
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400038539
T255687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400088968
MADS box
3
50
KIENEDAMFATFTNRREGLYKKARELATECNIDIRIMMVSPTSKPHSF
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400040848
Solanum tuberosum
PGSC0003DMG400040848
N
0.792
PGSC0003DMG400044457
Solanum tuberosum
PGSC0003DMG400044457
N
0.792
Solyc06g059780.1
Solanum lycopersicum
Solyc06g059780.1
N
0.750
Solyc06g054680.1
Solanum lycopersicum
Solyc06g054680.1
N
0.729
Solyc04g056740.1
Solanum lycopersicum
Solyc04g056740.1
N
0.708