PGSC0003DMG400039595 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400039595 T255695_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400090024 MADS box 22 69

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_040735 Theobroma cacao TCM_040735 N 0.771
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.771
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.750
gene07364-v1.0-hybrid Fragaria vesca gene07364-v1.0-hybrid N 0.750
29613.m000367 Ricinus communis 29613.m000367 N 0.729
cassava27416.m1 Manihot esculenta cassava27416.m1 N 0.729
mgf018529m Mimulus guttatus mgf018529m N 0.729
mgf024307m Mimulus guttatus mgf024307m N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.729
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.729
Bo3g009340 Brassica oleracea Bo3g009340 I 0.708
Bra006214 Brassica rapa Bra006214 I 0.708
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.708
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.708
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.708
AGL15 Populus trichocarpa POPTR_0009s06060 I 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
27866.m000233 Ricinus communis 27866.m000233 N 0.708
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.708
Cagra.5588s0006 Capsella grandiflora Cagra.5588s0006 I 0.708
Carubv10002596m.g Capsella rubella Carubv10002596m.g I 0.708
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.708
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.708
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.708
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.708
MDP0000237091 Malus domestica MDP0000237091 I 0.708
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.708
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.708
SapurV1A.0027s0860 Salix purpurea SapurV1A.0027s0860 I 0.708
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.708
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.708