CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400040285
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400040285
T255702_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400090714
MADS box
3
50
LIESESARMVSFSKRKKTLFQDANKFATQTGANVGVMLFSPSGRPFSY
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400037372
Solanum tuberosum
PGSC0003DMG400037372
N
0.854
Solyc09g061950.1
Solanum lycopersicum
Solyc09g061950.1
N
0.830
PGSC0003DMG400038730
Solanum tuberosum
PGSC0003DMG400038730
N
0.812
Solyc02g032000.1
Solanum lycopersicum
Solyc02g032000.1
N
0.809
PGSC0003DMG400046652
Solanum tuberosum
PGSC0003DMG400046652
N
0.792
Solyc03g119680.1
Solanum lycopersicum
Solyc03g119680.1
N
0.792
PGSC0003DMG400040743
Solanum tuberosum
PGSC0003DMG400040743
N
0.750