CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc03g119680.1
(
Solanum lycopersicum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Solyc03g119680.1
T256330_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc03g119680.1.1
MADS box
16
63
LIESEKARTVSFSKRKRTLFQDVDKFAAQTGADVGVMLFSPSGKPYSH
Links
Other
MADS box
family TFs
Other
Solanum lycopersicum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc02g032000.1
Solanum lycopersicum
Solyc02g032000.1
N
0.809
Solyc09g061950.1
Solanum lycopersicum
Solyc09g061950.1
N
0.809
PGSC0003DMG400038730
Solanum tuberosum
PGSC0003DMG400038730
N
0.792
PGSC0003DMG400040285
Solanum tuberosum
PGSC0003DMG400040285
N
0.792
PGSC0003DMG400037372
Solanum tuberosum
PGSC0003DMG400037372
N
0.750
PGSC0003DMG400046652
Solanum tuberosum
PGSC0003DMG400046652
N
0.729