CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g050950.1
(
Solanum lycopersicum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Solyc10g050950.1
T256373_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g050950.1.1
MADS box
16
63
KIENEKALLSSFSKRRNGLFKATNNLIKEFDVDIGIIVFSPTSKPHSF
Links
Other
MADS box
family TFs
Other
Solanum lycopersicum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc10g050900.1
Solanum lycopersicum
Solyc10g050900.1
N
0.896
Solyc10g050940.1
Solanum lycopersicum
Solyc10g050940.1
N
0.812
PGSC0003DMG400042890
Solanum tuberosum
PGSC0003DMG400042890
N
0.792
PGSC0003DMG400039674
Solanum tuberosum
PGSC0003DMG400039674
N
0.750