CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4BL_B8FFB0854
(
Triticum aestivum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Traes_4BL_B8FFB0854
T256559_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MADS50
M10968_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS50_01
0.729
0.729
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4BL_B8FFB0854.2
MADS box
11
58
RIEDRTSRQVRFSKRRSGLFKKAFEFGLLYDAEVALLVFSPAGRLYEY
Links
Other
MADS box
family TFs
Other
Triticum aestivum
TFs
237 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MADS50
Oryza sativa
OS03G0122600
D
0.729
AMTR_s00001p00266470
Amborella trichopoda
AMTR_s00001p00266470
I
0.708
AGL14
Arabidopsis thaliana
AT4G11880
I
0.708
BGIOSGA005076
Oryza indica
BGIOSGA005076
I
0.854
BGIOSGA007333
Oryza indica
BGIOSGA007333
I
0.771
BGIOSGA007336
Oryza indica
BGIOSGA007336
I
0.771
BGIOSGA018621
Oryza indica
BGIOSGA018621
I
0.708
BGIOSGA022872
Oryza indica
BGIOSGA022872
I
0.708
BGIOSGA026939
Oryza indica
BGIOSGA026939
I
0.708
BGIOSGA029053
Oryza indica
BGIOSGA029053
I
0.854
MADS56
Oryza indica
BGIOSGA033356
I
0.750
Bo4g108190
Brassica oleracea
Bo4g108190
I
0.708
Bo9g093920
Brassica oleracea
Bo9g093920
I
0.708
Bra014552
Brassica rapa
Bra014552
I
0.708
Bra029424
Brassica rapa
Bra029424
I
0.708
BRADI1G77020
Brachypodium distachyon
BRADI1G77020
I
0.708
BRADI2G59120
Brachypodium distachyon
BRADI2G59120
I
0.917
BRADI2G59187
Brachypodium distachyon
BRADI2G59187
I
0.896
BRADI3G00730
Brachypodium distachyon
BRADI3G00730
I
0.812
BRADI3G32090
Brachypodium distachyon
BRADI3G32090
I
0.750
BRADI3G41297
Brachypodium distachyon
BRADI3G41297
I
0.833
BRADI4G40350
Brachypodium distachyon
BRADI4G40350
I
0.708
F775_00385
Aegilops tauschii
F775_00385
I
0.875
F775_08627
Aegilops tauschii
F775_08627
I
0.750
F775_10590
Aegilops tauschii
F775_10590
I
0.812
F775_23758
Aegilops tauschii
F775_23758
I
0.875
F775_25597
Aegilops tauschii
F775_25597
I
0.729
F775_29801
Aegilops tauschii
F775_29801
I
0.750
F775_30822
Aegilops tauschii
F775_30822
I
0.708
F775_43625
Aegilops tauschii
F775_43625
I
0.958
AGL14
Arabidopsis lyrata
fgenesh2_kg.6__3138__AT4G11880.1
I
0.708
GLYMA05G03660
Glycine max
GLYMA05G03660
I
0.708
GLYMA05G29595
Glycine max
GLYMA05G29595
I
0.708
GLYMA07G08831
Glycine max
GLYMA07G08831
I
0.708
GLYMA08G12730
Glycine max
GLYMA08G12730
I
0.708
GLYMA09G40230
Glycine max
GLYMA09G40230
I
0.708
GLYMA10G38541
Glycine max
GLYMA10G38541
I
0.708
GLYMA18G45780
Glycine max
GLYMA18G45780
I
0.708
GLYMA20G29300
Glycine max
GLYMA20G29300
I
0.708
GRMZM2G010669
Zea mays
GRMZM2G010669
I
0.708
GRMZM2G026223
Zea mays
GRMZM2G026223
I
0.708
GRMZM2G070034
Zea mays
GRMZM2G070034
I
0.708
GRMZM2G098986
Zea mays
GRMZM2G098986
I
0.812
GRMZM2G160687
Zea mays
GRMZM2G160687
I
0.708
GRMZM2G171365
Zea mays
GRMZM2G171365
I
0.729
GRMZM2G171650
Zea mays
GRMZM2G171650
I
0.833
GRMZM2G320549
Zea mays
GRMZM2G320549
I
0.875
GSMUA_Achr11G15560_001
Musa acuminata
GSMUA_Achr11G15560_001
I
0.833
GSMUA_Achr5G20280_001
Musa acuminata
GSMUA_Achr5G20280_001
I
0.708
GSMUA_Achr8G09250_001
Musa acuminata
GSMUA_Achr8G09250_001
I
0.771
GSMUA_AchrUn_randomG20290_001
Musa acuminata
GSMUA_AchrUn_randomG20290_001
I
0.854
LPERR01G36730
Leersia perrieri
LPERR01G36730
I
0.854
LPERR02G00370
Leersia perrieri
LPERR02G00370
I
0.792
LPERR03G01640
Leersia perrieri
LPERR03G01640
I
0.750
LPERR06G00470
Leersia perrieri
LPERR06G00470
I
0.708
LPERR08G12860
Leersia perrieri
LPERR08G12860
I
0.708
LPERR08G18330
Leersia perrieri
LPERR08G18330
I
0.854
LPERR10G12950
Leersia perrieri
LPERR10G12950
I
0.750
LPERR12G05240
Leersia perrieri
LPERR12G05240
I
0.708
MLOC_12290
Hordeum vulgare
MLOC_12290
I
0.917
MLOC_57890
Hordeum vulgare
MLOC_57890
I
0.708
MLOC_76418
Hordeum vulgare
MLOC_76418
I
0.854
MTR_7g075870
Medicago truncatula
MTR_7g075870
I
0.708
MTR_8g033220
Medicago truncatula
MTR_8g033220
I
0.750
OB03G11760
Oryza brachyantha
OB03G11760
I
0.729
OB06G10570
Oryza brachyantha
OB06G10570
I
0.708
OB06G22200
Oryza brachyantha
OB06G22200
I
0.729
OB08G28340
Oryza brachyantha
OB08G28340
I
0.854
OB10G24040
Oryza brachyantha
OB10G24040
I
0.750
OB12G15620
Oryza brachyantha
OB12G15620
I
0.708
OBART01G42170
Oryza barthii
OBART01G42170
I
0.854
OBART02G00360
Oryza barthii
OBART02G00360
I
0.771
OBART03G01800
Oryza barthii
OBART03G01800
I
0.729
OBART06G14060
Oryza barthii
OBART06G14060
I
0.708
OBART08G21560
Oryza barthii
OBART08G21560
I
0.854
OBART10G16960
Oryza barthii
OBART10G16960
I
0.750
OBART12G05940
Oryza barthii
OBART12G05940
I
0.708
OGLUM01G46440
Oryza glumaepatula
OGLUM01G46440
I
0.854
OGLUM02G00350
Oryza glumaepatula
OGLUM02G00350
I
0.771
OGLUM03G01750
Oryza glumaepatula
OGLUM03G01750
I
0.729
OGLUM06G15040
Oryza glumaepatula
OGLUM06G15040
I
0.708
OGLUM08G16360
Oryza glumaepatula
OGLUM08G16360
I
0.708
OGLUM08G22840
Oryza glumaepatula
OGLUM08G22840
I
0.854
OGLUM10G16960
Oryza glumaepatula
OGLUM10G16960
I
0.750
OGLUM12G07150
Oryza glumaepatula
OGLUM12G07150
I
0.708
OLONG_001786
Oryza longistaminata
OLONG_001786
I
0.771
OLONG_006914
Oryza longistaminata
OLONG_006914
I
0.708
OLONG_010918
Oryza longistaminata
OLONG_010918
I
0.729
OLONG_011763
Oryza longistaminata
OLONG_011763
I
0.708
OLONG_017665
Oryza longistaminata
OLONG_017665
I
0.750
OLONG_018231
Oryza longistaminata
OLONG_018231
I
0.708
OMERI01G39210
Oryza meridionalis
OMERI01G39210
I
0.854
OMERI02G09250
Oryza meridionalis
OMERI02G09250
I
0.771
OMERI03G01730
Oryza meridionalis
OMERI03G01730
I
0.729
OMERI06G13650
Oryza meridionalis
OMERI06G13650
I
0.854
OMERI06G15180
Oryza meridionalis
OMERI06G15180
I
0.708
OMERI10G13430
Oryza meridionalis
OMERI10G13430
I
0.750
OMERI12G04040
Oryza meridionalis
OMERI12G04040
I
0.708
ONIVA01G48250
Oryza nivara
ONIVA01G48250
I
0.854
ONIVA02G00370
Oryza nivara
ONIVA02G00370
I
0.771
ONIVA03G01420
Oryza nivara
ONIVA03G01420
I
0.729
ONIVA06G16870
Oryza nivara
ONIVA06G16870
I
0.708
ONIVA08G16700
Oryza nivara
ONIVA08G16700
I
0.708
ONIVA08G24570
Oryza nivara
ONIVA08G24570
I
0.854
ONIVA10G18680
Oryza nivara
ONIVA10G18680
I
0.750
ONIVA12G05640
Oryza nivara
ONIVA12G05640
I
0.708
OPUNC01G41110
Oryza punctata
OPUNC01G41110
I
0.854
OPUNC02G00040
Oryza punctata
OPUNC02G00040
I
0.792
OPUNC03G01630
Oryza punctata
OPUNC03G01630
I
0.729
OPUNC06G00450
Oryza punctata
OPUNC06G00450
I
0.708
OPUNC06G13170
Oryza punctata
OPUNC06G13170
I
0.708
OPUNC08G13690
Oryza punctata
OPUNC08G13690
I
0.708
OPUNC08G18260
Oryza punctata
OPUNC08G18260
I
0.833
OPUNC08G19670
Oryza punctata
OPUNC08G19670
I
0.812
OPUNC10G15300
Oryza punctata
OPUNC10G15300
I
0.750
OPUNC12G05660
Oryza punctata
OPUNC12G05660
I
0.708
ORGLA01G0361900
Oryza glaberrima
ORGLA01G0361900
I
0.854
ORGLA02G0003200
Oryza glaberrima
ORGLA02G0003200
I
0.771
ORGLA03G0015400
Oryza glaberrima
ORGLA03G0015400
I
0.729
ORGLA06G0125600
Oryza glaberrima
ORGLA06G0125600
I
0.708
ORGLA08G0229900
Oryza glaberrima
ORGLA08G0229900
I
0.854
ORGLA10G0119200
Oryza glaberrima
ORGLA10G0119200
I
0.750
ORUFI01G45590
Oryza rufipogon
ORUFI01G45590
I
0.812
ORUFI02G00390
Oryza rufipogon
ORUFI02G00390
I
0.771
ORUFI03G01510
Oryza rufipogon
ORUFI03G01510
I
0.729
ORUFI05G07100
Oryza rufipogon
ORUFI05G07100
I
0.708
ORUFI06G14980
Oryza rufipogon
ORUFI06G14980
I
0.708
ORUFI08G24040
Oryza rufipogon
ORUFI08G24040
I
0.854
ORUFI10G17990
Oryza rufipogon
ORUFI10G17990
I
0.750
ORUFI12G06810
Oryza rufipogon
ORUFI12G06810
I
0.708
MADS51
Oryza sativa
OS01G0922800
I
0.812
OS02G0104100
Oryza sativa
OS02G0104100
I
0.771
OS05G0203800
Oryza sativa
OS05G0203800
I
0.708
OS06G0347700
Oryza sativa
OS06G0347700
I
0.708
OS08G0531900
Oryza sativa
OS08G0531900
I
0.854
MADS56
Oryza sativa
OS10G0536100
I
0.750
MADS13
Oryza sativa
OS12G0207000
I
0.708
PGSC0003DMG400022748
Solanum tuberosum
PGSC0003DMG400022748
I
0.750
POPTR_0001s08510
Populus trichocarpa
POPTR_0001s08510
I
0.708
POPTR_0002s15310
Populus trichocarpa
POPTR_0002s15310
I
0.708
POPTR_0004s06310
Populus trichocarpa
POPTR_0004s06310
I
0.708
POPTR_0014s07020
Populus trichocarpa
POPTR_0014s07020
I
0.729
PRUPE_ppa014428mg
Prunus persica
PRUPE_ppa014428mg
I
0.729
Sb01g049020
Sorghum bicolor
Sb01g049020
I
0.708
Sb03g006210
Sorghum bicolor
Sb03g006210
I
0.896
Sb03g044170
Sorghum bicolor
Sb03g044170
I
0.833
Sb04g000500
Sorghum bicolor
Sb04g000500
I
0.750
Sb07g026180
Sorghum bicolor
Sb07g026180
I
0.833
Sb08g006460
Sorghum bicolor
Sb08g006460
I
0.708
Si004582m.g
Setaria italica
Si004582m.g
I
0.875
Si005133m.g
Setaria italica
Si005133m.g
I
0.792
Si007683m.g
Setaria italica
Si007683m.g
I
0.750
Si008672m.g
Setaria italica
Si008672m.g
I
0.708
Si014540m.g
Setaria italica
Si014540m.g
I
0.812
Si015525m.g
Setaria italica
Si015525m.g
I
0.812
Si019985m.g
Setaria italica
Si019985m.g
I
0.750
Si022981m.g
Setaria italica
Si022981m.g
I
0.708
Si038257m.g
Setaria italica
Si038257m.g
I
0.729
Si038299m.g
Setaria italica
Si038299m.g
I
0.708
Solyc08g080100.2
Solanum lycopersicum
Solyc08g080100.2
I
0.750
TCM_005456
Theobroma cacao
TCM_005456
I
0.708
TCM_016147
Theobroma cacao
TCM_016147
I
0.708
Traes_1AL_6B108514B
Triticum aestivum
Traes_1AL_6B108514B
I
0.750
Traes_1AL_6F5982F88
Triticum aestivum
Traes_1AL_6F5982F88
I
0.708
Traes_1AS_3232D5589
Triticum aestivum
Traes_1AS_3232D5589
I
0.708
Traes_1BL_F1D5BF5F8
Triticum aestivum
Traes_1BL_F1D5BF5F8
I
0.750
Traes_1DL_D5BBCA2D0
Triticum aestivum
Traes_1DL_D5BBCA2D0
I
0.729
TRAES3BF009000010CFD_g
Triticum aestivum
TRAES3BF009000010CFD_g
I
0.875
TRAES3BF009000040CFD_g
Triticum aestivum
TRAES3BF009000040CFD_g
I
0.896
Traes_4DL_5633C0561
Triticum aestivum
Traes_4DL_5633C0561
I
0.750
Traes_5AS_7BFB385EF
Triticum aestivum
Traes_5AS_7BFB385EF
I
0.708
Traes_5DS_16243E52C
Triticum aestivum
Traes_5DS_16243E52C
I
0.708
Traes_6AS_D6ABA1D79
Triticum aestivum
Traes_6AS_D6ABA1D79
I
0.833
Traes_6DS_2BAD7A60A
Triticum aestivum
Traes_6DS_2BAD7A60A
I
0.833
Traes_7AS_F568FCBF1
Triticum aestivum
Traes_7AS_F568FCBF1
I
0.870
Traes_7BS_4D5DE99CC
Triticum aestivum
Traes_7BS_4D5DE99CC
I
0.800
Traes_7DS_4DF7EB08F
Triticum aestivum
Traes_7DS_4DF7EB08F
I
0.875
TRIUR3_18962
Triticum urartu
TRIUR3_18962
I
0.729
TRIUR3_19056
Triticum urartu
TRIUR3_19056
I
0.958
TRIUR3_20985
Triticum urartu
TRIUR3_20985
I
0.854
TRIUR3_21732
Triticum urartu
TRIUR3_21732
I
0.860
TRIUR3_22964
Triticum urartu
TRIUR3_22964
I
0.708
TRIUR3_27077
Triticum urartu
TRIUR3_27077
I
0.833
TRIUR3_28215
Triticum urartu
TRIUR3_28215
I
0.708
TRIUR3_28473
Triticum urartu
TRIUR3_28473
I
0.875
TRIUR3_30073
Triticum urartu
TRIUR3_30073
I
0.854
TRIUR3_30872
Triticum urartu
TRIUR3_30872
I
0.896
TRIUR3_32699
Triticum urartu
TRIUR3_32699
I
0.750
VIT_15s0048g01240
Vitis vinifera
VIT_15s0048g01240
I
0.729
Ca_16423
Cicer arietinum
Ca_16423
I
0.729
Cla011687
Citrullus lanatus
Cla011687
I
0.708
Pm018089
Prunus mume
Pm018089
I
0.729
cassava28648.m1
Manihot esculenta
cassava28648.m1
I
0.708
cassava30125.valid.m1
Manihot esculenta
cassava30125.valid.m1
I
0.708
cassava723.valid.m1
Manihot esculenta
cassava723.valid.m1
I
0.708
Cucsa.302640
Cucumis sativus
Cucsa.302640
I
0.708
mgf007062m
Mimulus guttatus
mgf007062m
I
0.708
mgf021705m
Mimulus guttatus
mgf021705m
I
0.708
Aquca_013_00471
Aquilegia coerulea
Aquca_013_00471
I
0.708
Bostr.15774s0334
Boechera stricta
Bostr.15774s0334
I
0.708
Bostr.25463s0138
Boechera stricta
Bostr.25463s0138
I
0.708
Cagra.7242s0001
Capsella grandiflora
Cagra.7242s0001
I
0.708
Carubv10001906m.g
Capsella rubella
Carubv10001906m.g
I
0.708
Carubv10027093m.g
Capsella rubella
Carubv10027093m.g
I
0.729
Ciclev10023160m.g
Citrus clementina
Ciclev10023160m.g
I
0.708
Eucgr.C01942
Eucalyptus grandis
Eucgr.C01942
I
0.708
Eucgr.D01939
Eucalyptus grandis
Eucgr.D01939
I
0.708
Eucgr.D02425
Eucalyptus grandis
Eucgr.D02425
I
0.708
gene19425-v1.0-hybrid
Fragaria vesca
gene19425-v1.0-hybrid
I
0.729
Lus10006715.g
Linum usitatissimum
Lus10006715.g
I
0.708
Lus10006716.g
Linum usitatissimum
Lus10006716.g
I
0.708
Lus10014143.g
Linum usitatissimum
Lus10014143.g
I
0.708
Lus10014144.g
Linum usitatissimum
Lus10014144.g
I
0.708
Lus10036543.g
Linum usitatissimum
Lus10036543.g
I
0.750
MDP0000314765
Malus domestica
MDP0000314765
I
0.708
orange1.1g028363m.g
Citrus sinensis
orange1.1g028363m.g
I
0.708
Pavir.Aa03568
Panicum virgatum
Pavir.Aa03568
I
0.708
Pavir.Ab00058
Panicum virgatum
Pavir.Ab00058
I
0.708
Pavir.Bb00005
Panicum virgatum
Pavir.Bb00005
I
0.781
Pavir.Cb01898
Panicum virgatum
Pavir.Cb01898
I
0.708
Pavir.Ea01147
Panicum virgatum
Pavir.Ea01147
I
0.708
Pavir.Fa00163
Panicum virgatum
Pavir.Fa00163
I
0.771
Pavir.Ia02902
Panicum virgatum
Pavir.Ia02902
I
0.702
Pavir.Ia04538
Panicum virgatum
Pavir.Ia04538
I
0.729
Pavir.Ib00012
Panicum virgatum
Pavir.Ib00012
I
0.708
Pavir.J02739
Panicum virgatum
Pavir.J02739
I
0.875
Pavir.J08622
Panicum virgatum
Pavir.J08622
I
0.851
Pavir.J19662
Panicum virgatum
Pavir.J19662
I
0.766
Pavir.J22336
Panicum virgatum
Pavir.J22336
I
0.708
Pavir.J26790
Panicum virgatum
Pavir.J26790
I
0.833
SapurV1A.0024s0570
Salix purpurea
SapurV1A.0024s0570
I
0.708
SapurV1A.0029s0080
Salix purpurea
SapurV1A.0029s0080
I
0.708
SapurV1A.0045s0580
Salix purpurea
SapurV1A.0045s0580
I
0.708
SapurV1A.0282s0240
Salix purpurea
SapurV1A.0282s0240
I
0.708
SapurV1A.0578s0130
Salix purpurea
SapurV1A.0578s0130
I
0.729
Thhalv10028949m.g
Eutrema salsugineum
Thhalv10028949m.g
I
0.708
PK19764.1
Cannabis sativa
PK19764.1
I
0.729