CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_00s0386g00010
(
Vitis vinifera
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
VIT_00s0386g00010
T256764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_00s0386g00010.t01
MADS box
16
63
LISASDARQVTFSKRRSGLFKKASELATLCDSETAVIAFSPGGKAFSF
Links
Other
MADS box
family TFs
Other
Vitis vinifera
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28830.m000229
Ricinus communis
28830.m000229
N
0.708
29613.m000367
Ricinus communis
29613.m000367
N
0.708
Al_scaffold_0002_1221
Arabidopsis lyrata
Al_scaffold_0002_1221
N
0.708
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.708
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.729
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.708
MDP0000274606
Malus domestica
MDP0000274606
N
0.708
Pm002317
Prunus mume
Pm002317
N
0.729
PRUPE_ppa024816mg
Prunus persica
PRUPE_ppa024816mg
I
0.708
PRUPE_ppb022733mg
Prunus persica
PRUPE_ppb022733mg
N
0.708
TCM_000878
Theobroma cacao
TCM_000878
N
0.766
Thhalv10012100m.g
Eutrema salsugineum
Thhalv10012100m.g
I
0.737