VIT_07s0005g06590 (Vitis vinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 VIT_07s0005g06590 T256786_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_07s0005g06590.t01 MADS box 10 57

Links

Other MADS box family TFs
Other Vitis vinifera TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_10s0003g03970 Vitis vinifera VIT_10s0003g03970 N 0.979
POPTR_0004s00400 Populus trichocarpa POPTR_0004s00400 N 0.750
Cla010744 Citrullus lanatus Cla010744 N 0.729
29613.m000367 Ricinus communis 29613.m000367 N 0.729
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.729
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.729
SapurV1A.0449s0130 Salix purpurea SapurV1A.0449s0130 N 0.729
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.729
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.729
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.708
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Ca_26354 Cicer arietinum Ca_26354 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
MDP0000233925 Malus domestica MDP0000233925 N 0.708
MDP0000278770 Malus domestica MDP0000278770 N 0.708
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708