VIT_10s0003g03970 (Vitis vinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 VIT_10s0003g03970 T256791_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_10s0003g03970.t01 MADS box 10 57

Links

Other MADS box family TFs
Other Vitis vinifera TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29613.m000367 Ricinus communis 29613.m000367 N 0.729
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Ca_26354 Cicer arietinum Ca_26354 N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.729
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.729
Cla010744 Citrullus lanatus Cla010744 N 0.750
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.750
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
MDP0000233925 Malus domestica MDP0000233925 N 0.708
MDP0000278770 Malus domestica MDP0000278770 N 0.708
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.708
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.708
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
POPTR_0004s00400 Populus trichocarpa POPTR_0004s00400 N 0.771
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
SapurV1A.0449s0130 Salix purpurea SapurV1A.0449s0130 N 0.750
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.708
VIT_07s0005g06590 Vitis vinifera VIT_07s0005g06590 N 0.979