CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_04661
(
Cicer arietinum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Ca_04661
T256890_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_04661
MADS box
17
64
KMSNENNLQVTFSKRRSGLFKKASELCTLCGAEVVLIVFSPSDKVFSF
Links
Other
MADS box
family TFs
Other
Cicer arietinum
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_007_00963
Aquilegia coerulea
Aquca_007_00963
N
Aquca_095_00021
Aquilegia coerulea
Aquca_095_00021
N
Aquca_780_00002
Aquilegia coerulea
Aquca_780_00002
N
evm.TU.contig_24967.4
Carica papaya
evm.TU.contig_24967.4
N
Ciclev10000383m.g
Citrus clementina
Ciclev10000383m.g
N
orange1.1g004450m.g
Citrus sinensis
orange1.1g004450m.g
N
Eucgr.F03610
Eucalyptus grandis
Eucgr.F03610
N
gene29166-v1.0-hybrid
Fragaria vesca
gene29166-v1.0-hybrid
N
MDP0000722905
Malus domestica
MDP0000722905
N
POPTR_0005s27900
Populus trichocarpa
POPTR_0005s27900
N
PRUPE_ppa026999mg
Prunus persica
PRUPE_ppa026999mg
N
SapurV1A.0554s0220
Salix purpurea
SapurV1A.0554s0220
N
TCM_034806
Theobroma cacao
TCM_034806
N
VIT_18s0122g00530
Vitis vinifera
VIT_18s0122g00530
N