Pm002317 (Prunus mume)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pm002317 T257024_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm002317 MADS box 13 60

Links

Other MADS box family TFs
Other Prunus mume TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppb022733mg Prunus persica PRUPE_ppb022733mg N 0.979
28830.m000229 Ricinus communis 28830.m000229 N 0.750
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.750
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.737
Bra026764 Brassica rapa Bra026764 N 0.729
VIT_00s0386g00010 Vitis vinifera VIT_00s0386g00010 N 0.729
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.729
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.729
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.708
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
TCM_000878 Theobroma cacao TCM_000878 N 0.708
Pm021070 Prunus mume Pm021070 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
29613.m000367 Ricinus communis 29613.m000367 N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.708
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.708
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.708
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.708