CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf022625m
(
Mimulus guttatus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
mgf022625m
T257452_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf022625m
MADS box
25
72
KIENLSNRQVTFSKRRVGLFKKASELCILSGAQIAIIVHSLGKRVFSF
Links
Other
MADS box
family TFs
Other
Mimulus guttatus
TFs
95 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf024454m
Mimulus guttatus
mgf024454m
N
0.917
Cla006571
Citrullus lanatus
Cla006571
N
0.771
Cucsa.298560
Cucumis sativus
Cucsa.298560
N
0.771
Ciclev10030142m.g
Citrus clementina
Ciclev10030142m.g
N
0.771
orange1.1g039654m.g
Citrus sinensis
orange1.1g039654m.g
N
0.771
AT4G36590
Arabidopsis thaliana
AT4G36590
N
0.750
PRUPE_ppa026089mg
Prunus persica
PRUPE_ppa026089mg
N
0.750
TCM_006323
Theobroma cacao
TCM_006323
N
0.750
Pm021018
Prunus mume
Pm021018
N
0.750
30099.m001672
Ricinus communis
30099.m001672
N
0.750
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
0.750
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
0.750
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
0.750
evm.TU.contig_30114.1
Carica papaya
evm.TU.contig_30114.1
N
0.750
evm.TU.supercontig_106.18
Carica papaya
evm.TU.supercontig_106.18
N
0.750
evm.TU.supercontig_505.2
Carica papaya
evm.TU.supercontig_505.2
N
0.750
evm.TU.supercontig_695.1
Carica papaya
evm.TU.supercontig_695.1
N
0.750
evm.TU.supercontig_695.7
Carica papaya
evm.TU.supercontig_695.7
N
0.750
evm.TU.supercontig_758.2
Carica papaya
evm.TU.supercontig_758.2
N
0.750
gene01789-v1.0-hybrid
Fragaria vesca
gene01789-v1.0-hybrid
N
0.750
AGL62
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002041
N
0.729
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.729
POPTR_0009s08750
Populus trichocarpa
POPTR_0009s08750
N
0.729
POPTR_0017s07460
Populus trichocarpa
POPTR_0017s07460
N
0.729
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
0.729
Solyc01g106730.1
Solanum lycopersicum
Solyc01g106730.1
N
0.729
Pm021071
Prunus mume
Pm021071
N
0.729
cassava33542.m1
Manihot esculenta
cassava33542.m1
N
0.729
Bostr.8705s0016
Boechera stricta
Bostr.8705s0016
N
0.729
Eucgr.G01185
Eucalyptus grandis
Eucgr.G01185
N
0.729
evm.TU.contig_28241.1
Carica papaya
evm.TU.contig_28241.1
N
0.729
evm.TU.contig_35713
Carica papaya
evm.TU.contig_35713
N
0.729
evm.TU.contig_35751
Carica papaya
evm.TU.contig_35751
N
0.729
evm.TU.contig_37271
Carica papaya
evm.TU.contig_37271
N
0.729
evm.TU.supercontig_106.20
Carica papaya
evm.TU.supercontig_106.20
N
0.729
evm.TU.supercontig_347.7
Carica papaya
evm.TU.supercontig_347.7
N
0.729
evm.TU.supercontig_505.4
Carica papaya
evm.TU.supercontig_505.4
N
0.729
evm.TU.supercontig_54.67
Carica papaya
evm.TU.supercontig_54.67
N
0.729
evm.TU.supercontig_54.68
Carica papaya
evm.TU.supercontig_54.68
N
0.729
evm.TU.supercontig_625.4
Carica papaya
evm.TU.supercontig_625.4
N
0.729
evm.TU.supercontig_654.6
Carica papaya
evm.TU.supercontig_654.6
N
0.729
Gorai.002G213500
Gossypium raimondii
Gorai.002G213500
N
0.729
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.729
MDP0000233925
Malus domestica
MDP0000233925
N
0.729
MDP0000278770
Malus domestica
MDP0000278770
N
0.729
SapurV1A.1313s0050
Salix purpurea
SapurV1A.1313s0050
N
0.729
Thhalv10000479m.g
Eutrema salsugineum
Thhalv10000479m.g
N
0.729
Thhalv10003338m.g
Eutrema salsugineum
Thhalv10003338m.g
N
0.729
Thhalv10003426m.g
Eutrema salsugineum
Thhalv10003426m.g
N
0.729
Thhalv10015908m.g
Eutrema salsugineum
Thhalv10015908m.g
N
0.729
chr3.CM0279.290.nc
Lotus japonicus
chr3.CM0279.290.nc
N
0.729
gene02453-v1.0-hybrid
Fragaria vesca
gene02453-v1.0-hybrid
N
0.714
Thhalv10012100m.g
Eutrema salsugineum
Thhalv10012100m.g
I
0.711
Al_scaffold_0002_1221
Arabidopsis lyrata
Al_scaffold_0002_1221
N
0.708
AGL61
Arabidopsis lyrata
Al_scaffold_0004_541
N
0.708
AGL61
Arabidopsis thaliana
AT2G24840
N
0.708
AGL62
Arabidopsis thaliana
AT5G60440
I
0.708
Bo5g113750
Brassica oleracea
Bo5g113750
N
0.708
Bra002480
Brassica rapa
Bra002480
N
0.708
GLYMA20G27320
Glycine max
GLYMA20G27320
N
0.708
MTR_1g075600
Medicago truncatula
MTR_1g075600
N
0.708
MTR_1g077360
Medicago truncatula
MTR_1g077360
N
0.708
PGSC0003DMG400045239
Solanum tuberosum
PGSC0003DMG400045239
N
0.708
POPTR_0007s03430
Populus trichocarpa
POPTR_0007s03430
N
0.708
PRUPE_ppa017246mg
Prunus persica
PRUPE_ppa017246mg
N
0.708
VIT_01s0010g01530
Vitis vinifera
VIT_01s0010g01530
N
0.708
VIT_03s0088g00510
Vitis vinifera
VIT_03s0088g00510
N
0.708
Pm021070
Prunus mume
Pm021070
N
0.708
29838.m001672
Ricinus communis
29838.m001672
N
0.708
Aquca_040_00096
Aquilegia coerulea
Aquca_040_00096
N
0.708
Bostr.7867s1515
Boechera stricta
Bostr.7867s1515
N
0.708
Cagra.1004s0007
Capsella grandiflora
Cagra.1004s0007
N
0.708
Carubv10024914m.g
Capsella rubella
Carubv10024914m.g
N
0.708
evm.TU.contig_24748.4
Carica papaya
evm.TU.contig_24748.4
N
0.708
evm.TU.contig_26687.3
Carica papaya
evm.TU.contig_26687.3
N
0.708
evm.TU.contig_30908.1
Carica papaya
evm.TU.contig_30908.1
N
0.708
evm.TU.contig_33038
Carica papaya
evm.TU.contig_33038
N
0.708
evm.TU.contig_41623
Carica papaya
evm.TU.contig_41623
N
0.708
evm.TU.supercontig_106.19
Carica papaya
evm.TU.supercontig_106.19
N
0.708
evm.TU.supercontig_1455.2
Carica papaya
evm.TU.supercontig_1455.2
N
0.708
evm.TU.supercontig_347.11
Carica papaya
evm.TU.supercontig_347.11
N
0.708
evm.TU.supercontig_348.4
Carica papaya
evm.TU.supercontig_348.4
N
0.708
evm.TU.supercontig_348.8
Carica papaya
evm.TU.supercontig_348.8
N
0.708
evm.TU.supercontig_505.6
Carica papaya
evm.TU.supercontig_505.6
N
0.708
evm.TU.supercontig_654.4
Carica papaya
evm.TU.supercontig_654.4
N
0.708
evm.TU.supercontig_695.5
Carica papaya
evm.TU.supercontig_695.5
N
0.708
evm.TU.supercontig_758.4
Carica papaya
evm.TU.supercontig_758.4
N
0.708
gene07364-v1.0-hybrid
Fragaria vesca
gene07364-v1.0-hybrid
N
0.708
Gorai.005G263100
Gossypium raimondii
Gorai.005G263100
N
0.708
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.708
Lus10031073.g
Linum usitatissimum
Lus10031073.g
N
0.708
MDP0000221590
Malus domestica
MDP0000221590
N
0.708
MDP0000434703
Malus domestica
MDP0000434703
I
0.708
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
0.708
Thhalv10022102m.g
Eutrema salsugineum
Thhalv10022102m.g
N
0.708