CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.15697s0292
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.15697s0292
T257580_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.15697s0292.1.p
MADS box
16
63
KIEKDADRLVTLSKRRNGIYTKLSELSILCGADVAFLGYSGSGKPYTF
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL85
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002660
N
0.938
AGL59
Arabidopsis thaliana
AT1G28460
N
0.792
AGL64
Arabidopsis thaliana
AT1G29962
N
0.938
AGL85
Arabidopsis thaliana
AT1G54760
N
0.846
AGL58
Arabidopsis thaliana
AT1G28450
N
0.771
Bo5g061120
Brassica oleracea
Bo5g061120
N
0.792
Bra032347
Brassica rapa
Bra032347
N
0.771
Cagra.5647s0017
Capsella grandiflora
Cagra.5647s0017
N
0.896
Cagra.18025s0001
Capsella grandiflora
Cagra.18025s0001
N
0.792
Cagra.12398s0004
Capsella grandiflora
Cagra.12398s0004
N
0.729
Carubv10010438m.g
Capsella rubella
Carubv10010438m.g
N
0.750
Carubv10022431m.g
Capsella rubella
Carubv10022431m.g
N
0.750
Carubv10022123m.g
Capsella rubella
Carubv10022123m.g
N
0.771
Carubv10022052m.g
Capsella rubella
Carubv10022052m.g
N
0.750
Carubv10021838m.g
Capsella rubella
Carubv10021838m.g
N
0.708
Carubv10021725m.g
Capsella rubella
Carubv10021725m.g
N
0.771
Carubv10021446m.g
Capsella rubella
Carubv10021446m.g
N
0.750
Carubv10021425m.g
Capsella rubella
Carubv10021425m.g
N
0.750
Carubv10012479m.g
Capsella rubella
Carubv10012479m.g
N
0.771
Carubv10012214m.g
Capsella rubella
Carubv10012214m.g
N
0.771
Carubv10011216m.g
Capsella rubella
Carubv10011216m.g
N
0.896
Carubv10010833m.g
Capsella rubella
Carubv10010833m.g
N
0.750
Carubv10010430m.g
Capsella rubella
Carubv10010430m.g
N
0.750
Carubv10002712m.g
Capsella rubella
Carubv10002712m.g
N
0.729
Carubv10002683m.g
Capsella rubella
Carubv10002683m.g
N
0.792
Thhalv10009431m.g
Eutrema salsugineum
Thhalv10009431m.g
N
0.729