Carubv10011075m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10011075m.g T257760_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10011075m MADS box 56 103

Links

Other MADS box family TFs
Other Capsella rubella TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0824s0100 Capsella grandiflora Cagra.0824s0100 N 1.000
Bostr.7128s0342 Boechera stricta Bostr.7128s0342 N 0.958
AT1G17310 Arabidopsis thaliana AT1G17310 N 0.896
fgenesh2_kg.1__1889__AT1G17310.1 Arabidopsis lyrata fgenesh2_kg.1__1889__AT1G17310.1 N 0.896
Bo8g104960 Brassica oleracea Bo8g104960 N 0.833
Bra026674 Brassica rapa Bra026674 N 0.833
Thhalv10009669m.g Eutrema salsugineum Thhalv10009669m.g N 0.812
Bo6g091550 Brassica oleracea Bo6g091550 N 0.771
Bo6g115840 Brassica oleracea Bo6g115840 N 0.771
Bra003884 Brassica rapa Bra003884 N 0.771
Bostr.10273s0116 Boechera stricta Bostr.10273s0116 N 0.771
AT1G72350 Arabidopsis thaliana AT1G72350 N 0.750
scaffold_202161.1 Arabidopsis lyrata scaffold_202161.1 N 0.729
Cagra.1013s0063 Capsella grandiflora Cagra.1013s0063 N 0.729
Carubv10021825m.g Capsella rubella Carubv10021825m.g N 0.729
Thhalv10019133m.g Eutrema salsugineum Thhalv10019133m.g N 0.729