CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10011345m.g
(
Capsella rubella
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Carubv10011345m.g
T257763_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10011345m
MADS box
11
56
FIENERSRLSTFCRRQCSIFKKADELSKIPDVEVCVLLLLRKRNQE
Links
Other
MADS box
family TFs
Other
Capsella rubella
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10024968m.g
Capsella rubella
Carubv10024968m.g
N
0.841
Carubv10012009m.g
Capsella rubella
Carubv10012009m.g
N
0.771
Carubv10011458m.g
Capsella rubella
Carubv10011458m.g
N
0.750
Carubv10012603m.g
Capsella rubella
Carubv10012603m.g
N
0.729