CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10006022m.g
(
Citrus clementina
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Ciclev10006022m.g
T257854_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10006022m
MADS box
10
54
QKIEMIITFSKRRSWIYKNASELVTLTGSEIAIVVFSQSGKPYTF
Links
Other
MADS box
family TFs
Other
Citrus clementina
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g048697m.g
Citrus sinensis
orange1.1g048697m.g
N
1.000
Ciclev10007015m.g
Citrus clementina
Ciclev10007015m.g
N
0.800
orange1.1g047467m.g
Citrus sinensis
orange1.1g047467m.g
N
0.800
Ciclev10006530m.g
Citrus clementina
Ciclev10006530m.g
N
0.756
Ciclev10006957m.g
Citrus clementina
Ciclev10006957m.g
N
0.756
orange1.1g044532m.g
Citrus sinensis
orange1.1g044532m.g
N
0.756
orange1.1g040485m.g
Citrus sinensis
orange1.1g040485m.g
N
0.733
Ciclev10006439m.g
Citrus clementina
Ciclev10006439m.g
N
0.711
Ciclev10007104m.g
Citrus clementina
Ciclev10007104m.g
N
0.711