evm.TU.contig_33091.2 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_33091.2 T258071_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_33091.2 MADS box 22 49

Links

Other MADS box family TFs
Other Carica papaya TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_35697 Carica papaya evm.TU.contig_35697 N 0.893
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.857
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.857
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.857
TCM_006323 Theobroma cacao TCM_006323 N 0.821
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.821
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.821
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.821
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.821
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.821
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.821
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.786
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.786
Pm021071 Prunus mume Pm021071 N 0.786
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.786
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.786
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.786
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.786
Bra038225 Brassica rapa Bra038225 N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.750
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.750
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.750
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.750
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
Pm021018 Prunus mume Pm021018 N 0.750
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.750
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.750
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.714
Bra002480 Brassica rapa Bra002480 N 0.714
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.714
MTR_3g067910 Medicago truncatula MTR_3g067910 N 0.714
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.714
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.714
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.714
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.714
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.714
evm.TU.contig_26687.1 Carica papaya evm.TU.contig_26687.1 N 0.714
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.714
evm.TU.contig_34792.1 Carica papaya evm.TU.contig_34792.1 N 0.714
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.714
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.714
evm.TU.supercontig_347.4 Carica papaya evm.TU.supercontig_347.4 N 0.714
evm.TU.supercontig_695.2 Carica papaya evm.TU.supercontig_695.2 N 0.714
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.714
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.714
MDP0000233925 Malus domestica MDP0000233925 N 0.714
MDP0000278770 Malus domestica MDP0000278770 N 0.714
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.714
PGSC0003DMG400045423 Solanum tuberosum PGSC0003DMG400045423 N 0.700