CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.contig_35697
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.contig_35697
T258088_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_35697.1
MADS box
22
49
LQASELSTLCGAEIAIIVFSPGQKVFSF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSP00000331540-D4
Bos grunniens
ENSP00000331540-D4
N
ZNF829
Bos taurus
ENSBTAG00000040108
N
ZNF829
Callithrix jacchus
ENSCJAG00000013405
N
ENSCAFG00000029513
Canis familiaris
ENSCAFG00000029513
N
ZNF829
Equus caballus
ENSECAG00000014571
N
ZNF829
Homo sapiens
ENSG00000185869
N
ENSMMUP00000020820
Macaca fascicularis
ENSMMUP00000020820
N
ZNF829
Macaca mulatta
ENSMMUG00000015835
N
ZNF829
Microcebus murinus
ENSMICG00000003417
N
ENSMPUG00000005519
Mustela putorius furo
ENSMPUG00000005519
N
ENSNLEG00000026641
Nomascus leucogenys
ENSNLEG00000026641
N
ZNF829
Pan troglodytes
ENSPTRG00000010903
N
ZNF829
Pteropus vampyrus
ENSPVAG00000002859
N
ENSSSCG00000002936
Sus scrofa
ENSSSCG00000002936
N
ZNF829
Tupaia belangeri
ENSTBEG00000009878
N
ZNF829
Tursiops truncatus
ENSTTRG00000013694
N