CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_106.21
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_106.21
T258149_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_106.21
MADS box
15
62
KMSNETNPQVTFSKRKAGIFKKASELSTFYSVEIAIIIFSPGKKIFSF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.contig_37489
Carica papaya
evm.TU.contig_37489
N
0.800
evm.TU.supercontig_758.1
Carica papaya
evm.TU.supercontig_758.1
N
0.792
evm.TU.supercontig_851.1
Carica papaya
evm.TU.supercontig_851.1
N
0.792
evm.TU.contig_24748.5
Carica papaya
evm.TU.contig_24748.5
N
0.771
evm.TU.contig_26687.3
Carica papaya
evm.TU.contig_26687.3
N
0.771
evm.TU.contig_27553.3
Carica papaya
evm.TU.contig_27553.3
N
0.771
evm.TU.contig_30908.1
Carica papaya
evm.TU.contig_30908.1
N
0.771
evm.TU.contig_33038
Carica papaya
evm.TU.contig_33038
N
0.771
evm.TU.contig_37082
Carica papaya
evm.TU.contig_37082
N
0.771
evm.TU.contig_38155.1
Carica papaya
evm.TU.contig_38155.1
N
0.771
evm.TU.supercontig_1455.2
Carica papaya
evm.TU.supercontig_1455.2
N
0.771
evm.TU.supercontig_347.10
Carica papaya
evm.TU.supercontig_347.10
N
0.771
evm.TU.supercontig_347.2
Carica papaya
evm.TU.supercontig_347.2
N
0.771
evm.TU.supercontig_348.3
Carica papaya
evm.TU.supercontig_348.3
N
0.771
evm.TU.supercontig_348.4
Carica papaya
evm.TU.supercontig_348.4
N
0.771
evm.TU.supercontig_439.1
Carica papaya
evm.TU.supercontig_439.1
N
0.771
evm.TU.supercontig_505.5
Carica papaya
evm.TU.supercontig_505.5
N
0.771
evm.TU.supercontig_654.5
Carica papaya
evm.TU.supercontig_654.5
N
0.771
evm.TU.supercontig_758.4
Carica papaya
evm.TU.supercontig_758.4
N
0.771
30099.m001672
Ricinus communis
30099.m001672
N
0.750
evm.TU.contig_28241.1
Carica papaya
evm.TU.contig_28241.1
N
0.750
evm.TU.contig_33091.3
Carica papaya
evm.TU.contig_33091.3
N
0.750
evm.TU.contig_35157.2
Carica papaya
evm.TU.contig_35157.2
N
0.750
evm.TU.contig_35751
Carica papaya
evm.TU.contig_35751
N
0.750
evm.TU.contig_37271
Carica papaya
evm.TU.contig_37271
N
0.750
evm.TU.supercontig_347.7
Carica papaya
evm.TU.supercontig_347.7
N
0.750
evm.TU.supercontig_348.9
Carica papaya
evm.TU.supercontig_348.9
N
0.750
evm.TU.supercontig_625.4
Carica papaya
evm.TU.supercontig_625.4
N
0.750
evm.TU.supercontig_654.6
Carica papaya
evm.TU.supercontig_654.6
N
0.750
VIT_01s0010g01530
Vitis vinifera
VIT_01s0010g01530
N
0.729
Cla006571
Citrullus lanatus
Cla006571
N
0.729
cassava33542.m1
Manihot esculenta
cassava33542.m1
N
0.729
Cucsa.298560
Cucumis sativus
Cucsa.298560
N
0.729
evm.TU.contig_24748.4
Carica papaya
evm.TU.contig_24748.4
N
0.729
evm.TU.contig_27313
Carica papaya
evm.TU.contig_27313
N
0.729
evm.TU.contig_30114.1
Carica papaya
evm.TU.contig_30114.1
N
0.729
evm.TU.contig_35713
Carica papaya
evm.TU.contig_35713
N
0.729
evm.TU.supercontig_1259.1
Carica papaya
evm.TU.supercontig_1259.1
N
0.729
evm.TU.supercontig_347.11
Carica papaya
evm.TU.supercontig_347.11
N
0.729
evm.TU.supercontig_348.8
Carica papaya
evm.TU.supercontig_348.8
N
0.729
evm.TU.supercontig_505.2
Carica papaya
evm.TU.supercontig_505.2
N
0.729
evm.TU.supercontig_505.4
Carica papaya
evm.TU.supercontig_505.4
N
0.729
evm.TU.supercontig_654.4
Carica papaya
evm.TU.supercontig_654.4
N
0.729
evm.TU.supercontig_695.1
Carica papaya
evm.TU.supercontig_695.1
N
0.729
evm.TU.supercontig_695.7
Carica papaya
evm.TU.supercontig_695.7
N
0.729
evm.TU.supercontig_695.8
Carica papaya
evm.TU.supercontig_695.8
N
0.729
evm.TU.supercontig_758.2
Carica papaya
evm.TU.supercontig_758.2
N
0.729
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
0.729
Bra022434
Brassica rapa
Bra022434
N
0.708
POPTR_0009s08750
Populus trichocarpa
POPTR_0009s08750
N
0.708
PRUPE_ppa022494mg
Prunus persica
PRUPE_ppa022494mg
N
0.708
TCM_006323
Theobroma cacao
TCM_006323
N
0.708
Pm021017
Prunus mume
Pm021017
N
0.708
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
0.708
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
0.708
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
0.708
Ciclev10030142m.g
Citrus clementina
Ciclev10030142m.g
N
0.708
evm.TU.contig_30005.4
Carica papaya
evm.TU.contig_30005.4
N
0.708
evm.TU.contig_30689
Carica papaya
evm.TU.contig_30689
N
0.708
evm.TU.contig_37107
Carica papaya
evm.TU.contig_37107
N
0.708
evm.TU.contig_38604
Carica papaya
evm.TU.contig_38604
N
0.708
evm.TU.contig_41623
Carica papaya
evm.TU.contig_41623
N
0.708
evm.TU.supercontig_106.18
Carica papaya
evm.TU.supercontig_106.18
N
0.708
evm.TU.supercontig_106.19
Carica papaya
evm.TU.supercontig_106.19
N
0.708
evm.TU.supercontig_347.8
Carica papaya
evm.TU.supercontig_347.8
N
0.708
evm.TU.supercontig_348.1
Carica papaya
evm.TU.supercontig_348.1
N
0.708
evm.TU.supercontig_439.7
Carica papaya
evm.TU.supercontig_439.7
N
0.708
evm.TU.supercontig_54.68
Carica papaya
evm.TU.supercontig_54.68
N
0.708
evm.TU.supercontig_695.5
Carica papaya
evm.TU.supercontig_695.5
N
0.708
orange1.1g039654m.g
Citrus sinensis
orange1.1g039654m.g
N
0.708