CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G302800
(
Gossypium raimondii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Gorai.009G302800
T258450_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G302800.1
MADS box
10
56
LISNEYARKTTLKKRKAGLLKKLSELTTLCGVAACAIIFSSYDAQPD
Links
Other
MADS box
family TFs
Other
Gossypium raimondii
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava38612.m1
Manihot esculenta
cassava38612.m1
N
0.829
TCM_021050
Theobroma cacao
TCM_021050
N
0.826
SapurV1A.0690s0130
Salix purpurea
SapurV1A.0690s0130
N
0.804
TCM_036473
Theobroma cacao
TCM_036473
N
0.800
AGL87
Populus trichocarpa
POPTR_0013s11210
N
0.766
Ciclev10003090m.g
Citrus clementina
Ciclev10003090m.g
N
0.739
orange1.1g040635m.g
Citrus sinensis
orange1.1g040635m.g
N
0.739
30199.m000879
Ricinus communis
30199.m000879
I
0.702