CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10035029.g
(
Linum usitatissimum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Lus10035029.g
T258620_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10035029
MADS box
10
57
LIGDKSSRQVTFSKRRKGLFKKAADISVLCDVQLALVIFSPAGRLYEF
Links
Other
MADS box
family TFs
Other
Linum usitatissimum
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_008716
Theobroma cacao
TCM_008716
I
0.771
Lus10003123.g
Linum usitatissimum
Lus10003123.g
N
0.771
MLOC_76418
Hordeum vulgare
MLOC_76418
I
0.750
Sb07g026180
Sorghum bicolor
Sb07g026180
I
0.750
Si014540m.g
Setaria italica
Si014540m.g
I
0.750
BGIOSGA029053
Oryza indica
BGIOSGA029053
I
0.729
F775_00385
Aegilops tauschii
F775_00385
I
0.729
F775_23758
Aegilops tauschii
F775_23758
I
0.729
LPERR08G18330
Leersia perrieri
LPERR08G18330
I
0.729
OBART08G21560
Oryza barthii
OBART08G21560
I
0.729
OGLUM08G22840
Oryza glumaepatula
OGLUM08G22840
I
0.729
OMERI06G13650
Oryza meridionalis
OMERI06G13650
I
0.729
ONIVA08G24570
Oryza nivara
ONIVA08G24570
I
0.729
ORGLA08G0229900
Oryza glaberrima
ORGLA08G0229900
I
0.729
ORUFI08G24040
Oryza rufipogon
ORUFI08G24040
I
0.729
OS08G0531900
Oryza sativa
OS08G0531900
I
0.729
TCM_017242
Theobroma cacao
TCM_017242
I
0.729
Traes_7DS_4DF7EB08F
Triticum aestivum
Traes_7DS_4DF7EB08F
I
0.729
Lus10037039.g
Linum usitatissimum
Lus10037039.g
I
0.729
Pavir.J26790
Panicum virgatum
Pavir.J26790
I
0.729
SapurV1A.0173s0350
Salix purpurea
SapurV1A.0173s0350
I
0.729
SapurV1A.1446s0020
Salix purpurea
SapurV1A.1446s0020
I
0.729
SapurV1A.1717s0010
Salix purpurea
SapurV1A.1717s0010
I
0.729
BRADI3G41297
Brachypodium distachyon
BRADI3G41297
I
0.708
OB08G28340
Oryza brachyantha
OB08G28340
I
0.708
OPUNC08G18260
Oryza punctata
OPUNC08G18260
I
0.708
OPUNC08G19670
Oryza punctata
OPUNC08G19670
I
0.708
POPTR_0001s13660
Populus trichocarpa
POPTR_0001s13660
I
0.708
Si008672m.g
Setaria italica
Si008672m.g
I
0.708
Traes_7AS_F568FCBF1
Triticum aestivum
Traes_7AS_F568FCBF1
I
0.708
cassava15798.m1
Manihot esculenta
cassava15798.m1
I
0.708
Eucgr.H04618
Eucalyptus grandis
Eucgr.H04618
I
0.708
Lus10015766.g
Linum usitatissimum
Lus10015766.g
I
0.708
MDP0000186558
Malus domestica
MDP0000186558
I
0.708
MDP0000218227
Malus domestica
MDP0000218227
I
0.708
SapurV1A.0173s0340
Salix purpurea
SapurV1A.0173s0340
I
0.708
SapurV1A.0658s0010
Salix purpurea
SapurV1A.0658s0010
I
0.708
SapurV1A.0833s0010
Salix purpurea
SapurV1A.0833s0010
I
0.708
SapurV1A.2188s0030
Salix purpurea
SapurV1A.2188s0030
I
0.708
SapurV1A.5743s0010
Salix purpurea
SapurV1A.5743s0010
I
0.708
Thhalv10014716m.g
Eutrema salsugineum
Thhalv10014716m.g
I
0.708