SapurV1A.0458s0040 (Salix purpurea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 SapurV1A.0458s0040 T259037_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0458s0040.1.p MADS box 10 55

Links

Other MADS box family TFs
Other Salix purpurea TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.870
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.913
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.913
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.750
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.750
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.978
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.804
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.870
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.804
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.870
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.783
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.870
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.783
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.826
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.739
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.913
29813.m001508 Ricinus communis 29813.m001508 I 0.913
Pm006479 Prunus mume Pm006479 I 0.957
Cla018884 Citrullus lanatus Cla018884 I 0.739
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.826
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.766
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.761
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.870
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.723
PK03147.1 Cannabis sativa PK03147.1 I 0.978
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.739
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.761
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.708
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.891
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.723
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.723
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.978
MDP0000919323 Malus domestica MDP0000919323 I 0.956
MDP0000773068 Malus domestica MDP0000773068 I 0.956
MDP0000147667 Malus domestica MDP0000147667 I 0.935
MDP0000146415 Malus domestica MDP0000146415 I 0.956
MDP0000146231 Malus domestica MDP0000146231 I 0.935
Bra004393 Brassica rapa Bra004393 I 0.783
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.717
Cla010361 Citrullus lanatus Cla010361 I 0.870
F775_13266 Aegilops tauschii F775_13266 I 0.739
Bra031049 Brassica rapa Bra031049 I 0.729
Bra025685 Brassica rapa Bra025685 I 0.766
Bra024792 Brassica rapa Bra024792 I 0.826
Bra017404 Brassica rapa Bra017404 I 0.848
Bra016544 Brassica rapa Bra016544 I 0.729
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.739
Bo8g104060 Brassica oleracea Bo8g104060 I 0.729
Bo8g068060 Brassica oleracea Bo8g068060 I 0.729
Bo7g080890 Brassica oleracea Bo7g080890 I 0.826
Bo6g109050 Brassica oleracea Bo6g109050 I 0.783
AGL30 Arabidopsis thaliana AT2G03060 I 0.848
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.826
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.826
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.739
Ca_18082 Cicer arietinum Ca_18082 I 0.891
Ca_16376 Cicer arietinum Ca_16376 I 0.913
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.739
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.739
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.739
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.739
TCM_011687 Theobroma cacao TCM_011687 I 0.935
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.957
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.978
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.891
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.783
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.957
GLYMA02G12131 Glycine max GLYMA02G12131 N 0.783
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.891
Si028357m.g Setaria italica Si028357m.g N 0.717
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.848
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.957
Bo9g072860 Brassica oleracea Bo9g072860 N 0.870
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.826
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.848
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.891
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.826
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N 0.787
AGL94 Arabidopsis thaliana AT1G69540 N 0.783
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.894