Thhalv10028255m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10028255m.g T259199_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10028255m MADS box 15 62

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.875
Bo4g165540 Brassica oleracea Bo4g165540 N 0.750
Bra011938 Brassica rapa Bra011938 N 0.750
Bo4g070340 Brassica oleracea Bo4g070340 N 0.745
AGL62 Arabidopsis thaliana AT5G60440 I 0.729
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.729
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.729
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.729
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.729
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.729
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.729
Pm021070 Prunus mume Pm021070 N 0.729
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.729
MDP0000434703 Malus domestica MDP0000434703 I 0.729
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.729
Bo1g112460 Brassica oleracea Bo1g112460 N 0.708
Bra022434 Brassica rapa Bra022434 N 0.708
Bra035685 Brassica rapa Bra035685 N 0.708
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.708
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.708
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.708
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.708
Ca_04665 Cicer arietinum Ca_04665 N 0.708
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Ca_26354 Cicer arietinum Ca_26354 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
MDP0000233925 Malus domestica MDP0000233925 N 0.708
MDP0000278770 Malus domestica MDP0000278770 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708