CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjB17L21.50.nd
(
Lotus japonicus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
LjB17L21.50.nd
T259367_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjB17L21.50.nd
MADS box
21
68
KITNPNSLQVAFSKRRGGLFKKVNELGILCGGDFVLIIFSPSGKVFSF
Links
Other
MADS box
family TFs
Other
Lotus japonicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30170.m014146
Ricinus communis
30170.m014146
I
AT2G21230
Arabidopsis thaliana
AT2G21230
D
Bo4g052150
Brassica oleracea
Bo4g052150
I
Bo4g145800
Brassica oleracea
Bo4g145800
I
Bostr.24513s0082
Boechera stricta
Bostr.24513s0082
I
Bostr.5022s0114
Boechera stricta
Bostr.5022s0114
I
Bra030314
Brassica rapa
Bra030314
I
Cagra.2961s0025
Capsella grandiflora
Cagra.2961s0025
I
Cagra.6952s0017
Capsella grandiflora
Cagra.6952s0017
I
Carubv10023063m.g
Capsella rubella
Carubv10023063m.g
I
fgenesh2_kg.4__1126__AT2G31370.4
Arabidopsis lyrata
fgenesh2_kg.4__1126__AT2G31370.4
I
fgenesh2_kg.4__38__AT2G21230.1
Arabidopsis lyrata
fgenesh2_kg.4__38__AT2G21230.1
I
GSMUA_Achr11G03050_001
Musa acuminata
GSMUA_Achr11G03050_001
I
mgf012126m
Mimulus guttatus
mgf012126m
I
mgf013572m
Mimulus guttatus
mgf013572m
I
MTR_6g034945
Medicago truncatula
MTR_6g034945
I
PDK_20s1584971g001
Phoenix dactylifera
PDK_20s1584971g001
I
POSF21
Arabidopsis thaliana
AT2G31370
I
Thhalv10000129m.g
Eutrema salsugineum
Thhalv10000129m.g
I
Thhalv10016790m.g
Eutrema salsugineum
Thhalv10016790m.g
I