LjSGA_020620.1 (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjSGA_020620.1 T259371_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_020620.1 MADS box 53 100

Links

Other MADS box family TFs
Other Lotus japonicus TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.750
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.750
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.750
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.750
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.737
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.729
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.729
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.729
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.729
Ca_04661 Cicer arietinum Ca_04661 N 0.729
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.729
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.729
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.729
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.729
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.708
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.708
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.708
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.708
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.708
Ca_04665 Cicer arietinum Ca_04665 N 0.708
Cla006571 Citrullus lanatus Cla006571 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.708
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.708