CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AEPI007010
(
Anopheles epiroticus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
AEPI007010
T259488_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bs
M03915_2.00
Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN
SELEX
Nitta et al.(2015)
bs_1
0.929
0.929
bs
M03916_2.00
Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN
SELEX
Nitta et al.(2015)
bs_2
0.929
0.929
srfA
M02283_2.00
Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK
PBM
Weirauch et al.(2014)
pTH5539
0.893
0.893
Srf
M00178_2.00
Mus musculus
NNDDWWHHNN
NNDDWWHHNN
PBM
Badis et al.(2009)
Srf_3509
0.893
0.893
SRF
M03341_2.00
Homo sapiens
DCCWTATATGGT
ACCATATAWGGH
SELEX
Jolma et al.(2013)
SRF_1
0.893
0.893
SRF
M03342_2.00
Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA
SELEX
Jolma et al.(2013)
SRF_2
0.893
0.893
SRF
M05553_2.00
Homo sapiens
CCNTANAWGG
CCWTNTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX
0.893
0.893
SRF
M07981_2.00
Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN
ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha
0.893
0.893
SRF
M07982_2.00
Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG
ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha
0.893
0.893
SRF
M07983_2.00
Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha
0.893
0.893
SRF
M07984_2.00
Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC
ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha
0.893
0.893
SRF
M09249_2.00
Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND
Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A
0.893
0.893
Srf
M09254_2.00
Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN
Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A
0.893
0.893
Srf
M09598_2.00
Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG
Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al.
0.893
0.893
SRF
M10947_2.00
Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK
Transfac
Matys et al.(2006)
V$SRF_01
0.893
0.893
SRF
M10948_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_02
0.893
0.893
SRF
M10949_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_03
0.893
0.893
SRF
M10950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_09
0.893
0.893
SRF
M10951_2.00
Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH
Transfac
Matys et al.(2006)
V$SRF_C
0.893
0.893
SRF
M10952_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q3
0.893
0.893
SRF
M10953_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q4
0.893
0.893
SRF
M10954_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_01
0.893
0.893
SRF
M10955_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_02
0.893
0.893
SRF
M10956_2.00
Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV
Transfac
Matys et al.(2006)
V$SRF_Q6
0.893
0.893
SRF
M05554_2.00
Homo sapiens
CCNTAYAWGG
CCWTRTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX
0.893
0.893
unc-120
M00684_2.00
Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG
PBM
Narasimhan et al.(2015)
pTH10822
0.857
0.857
MCM1
M01558_2.00
Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR
PBM
Zhu et al.(2009)
Mcm1
0.750
0.750
MCM1
M08589_2.00
Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND
Misc
DeBoer et al.(2011)
YMR043W_831
0.750
0.750
MCM1
M10990_2.00
Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW
Transfac
Matys et al.(2006)
F$MCM1_01
0.750
0.750
MCM1
M10991_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_02
0.750
0.750
MCM1
M10992_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_Q6
0.750
0.750
MCM1
M08458_2.00
Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA
COMPILED
Mathelier et al.(2014)
MA0331.1
0.750
0.750
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AEPI007010-PA
MADS box
5
32
SAAYELSTLTGTQVMLLVASETGHVYTF
Links
Other
MADS box
family TFs
Other
Anopheles epiroticus
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA006325
Anopheles arabiensis
AARA006325
I
0.964
ADAC008363
Anopheles darlingi
ADAC008363
I
0.963
MESCA001358
Megaselia scalaris
MESCA001358
I
0.963
SINV23954
Solenopsis invicta
SINV23954
I
0.963
ACHR000964
Anopheles christyi
ACHR000964
I
0.963
ADIR000346
Anopheles dirus
ADIR000346
I
0.963
AFUN006147
Anopheles funestus
AFUN006147
I
0.963
ASIS007770
Anopheles sinensis
ASIS007770
I
0.963
ASTEI07120
Anopheles stephensi
ASTEI07120
I
0.963
TELCIR_12851
Teladorsagia circumcincta
TELCIR_12851
I
0.963
SRF
Gorilla gorilla
ENSGGOG00000006293
I
0.962
ENSGMOG00000001540
Gadus morhua
ENSGMOG00000001540
I
0.962
ENSOPRG00000002509
Ochotona princeps
ENSOPRG00000002509
I
0.962
SRF
Vicugna pacos
ENSVPAG00000008912
I
0.962
Brh_R011000
Buceros rhinoceros
Brh_R011000
I
0.962
ANCDUO_04431
Ancylostoma duodenale
ANCDUO_04431
I
0.962
HPLM_0000743501
Haemonchus placei
HPLM_0000743501
I
0.962
AAEL008720
Aedes aegypti
AAEL008720
I
0.929
AAEL010926
Aedes aegypti
AAEL010926
I
0.929
HMEL017830
Heliconius melpomene
HMEL017830
I
0.929
MCINX015635
Melitaea cinxia
MCINX015635
I
0.929
CLEC013390
Cimex lectularius
CLEC013390
I
0.929
ACOM041693
Anopheles coluzzii
ACOM041693
I
0.929
AFAF013563
Anopheles farauti
AFAF013563
I
0.929
AMIN001258
Anopheles minimus
AMIN001258
I
0.929
AQUA001308
Anopheles quadriannulatus
AQUA001308
I
0.929
SRF
Cavia porcellus
ENSCPOG00000022327
I
0.926
ENSFALG00000000878
Ficedula albicollis
ENSFALG00000000878
I
0.926
SRF
Loxodonta africana
ENSLAFG00000010278
I
0.926
ENSMLUG00000008828
Myotis lucifugus
ENSMLUG00000008828
I
0.926
SRF
Taeniopygia guttata
ENSTGUG00000004738
I
0.926
Aan_R005414
Calypte anna
Aan_R005414
I
0.926
Afo_R000461
Aptenodytes forsteri
Afo_R000461
I
0.926
Gfo_R009695
Geospiza fortis
Gfo_R009695
I
0.926
BGIBMGA001384
Bombyx mori
BGIBMGA001384
I
0.897
HHAL001485-PA
Halyomorpha halys
HHAL001485-PA
I
0.897
LCUP011663
Lucilia cuprina
LCUP011663
I
0.897
AATE011966
Anopheles atroparvus
AATE011966
I
0.897
ENSOARG00000005757
Ovis aries
ENSOARG00000005757
I
0.893
ENSPFOG00000018770
Poecilia formosa
ENSPFOG00000018770
I
0.893
O9G_005180
Rozella allomycis
O9G_005180
I
0.893
Hba_21368
Heterorhabditis bacteriophora
Hba_21368
I
0.893
TELCIR_03792
Teladorsagia circumcincta
TELCIR_03792
I
0.893
SRF
Erinaceus europaeus
ENSEEUG00000005614
I
0.885
SRF
Sorex araneus
ENSSARG00000003401
I
0.885
LLOJ005985
Lutzomyia longipalpis
LLOJ005985
I
0.867
Cmyd_10009988
Chelonia mydas
Cmyd_10009988
I
0.862
ENSP00000265354
Macaca fascicularis
ENSP00000265354
I
0.833
BXY_0217000
Bursaphelenchus xylophilus
BXY_0217000
I
0.828
Myotis_brandtii_SRF_10026135
Myotis brandtii
Myotis_brandtii_SRF_10026135
I
0.806
Ogr17973
Ophisaurus gracilis
Ogr17973
I
0.806
RO3G_07165
Rhizopus oryzae
RO3G_07165
I
0.793
CpipJ_CPIJ008335
Culex pipiens
CpipJ_CPIJ008335
I
0.788
AGAP010512
Anopheles gambiae
AGAP010512
I
0.788
CPIJ008335
Culex quinquefasciatus
CPIJ008335
I
0.788
SNOG_07763
Stagonospora nodorum
SNOG_07763
I
0.759
AWRI1499_3592
Brettanomyces bruxellensis
AWRI1499_3592
I
0.759
SNOG_07764
Phaeosphaeria nodorum
SNOG_07764
I
0.759
fgenesh1_kg.C_scaffold_2000029
Cochliobolus heterostrophus C5
fgenesh1_kg.C_scaffold_2000029
I
0.759
J056_002827
Wallemia ichthyophaga
J056_002827
I
0.750
WALSEDRAFT_9958
Wallemia sebi
WALSEDRAFT_9958
I
0.750
AALB009948
Anopheles albimanus
AALB009948
I
0.743
ACUA004576
Anopheles culicifacies
ACUA004576
I
0.722
NCER_102270
Nosema ceranae
NCER_102270
I
0.714