Lus10027980.g (Linum usitatissimum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Lus10027980.g T261544_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10027980 MBD 97 170

Links

Other MBD family TFs
Other Linum usitatissimum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10008176.g Linum usitatissimum Lus10008176.g N 0.986
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.865
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N 0.865
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 0.865
29703.m001533 Ricinus communis 29703.m001533 N 0.838
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.838
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.838
Lus10029631.g Linum usitatissimum Lus10029631.g N 0.838
Lus10042674.g Linum usitatissimum Lus10042674.g N 0.824
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N 0.811
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.797
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.784
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.770
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.770
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.770
MBD4 Arabidopsis thaliana AT3G63030 N 0.757
MBD1 Arabidopsis lyrata scaffold_702078.1 N 0.757
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.757
SapurV1A.0633s0290 Salix purpurea SapurV1A.0633s0290 N 0.757
SapurV1A.0633s0300 Salix purpurea SapurV1A.0633s0300 N 0.757
MBD1 Arabidopsis thaliana AT4G22745 N 0.743
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N 0.730
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 0.730
SapurV1A.0135s0370 Salix purpurea SapurV1A.0135s0370 N 0.730
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N 0.730
Bo8g098350 Brassica oleracea Bo8g098350 N 0.716
Bra007723 Brassica rapa Bra007723 N 0.716
Bo4g098290 Brassica oleracea Bo4g098290 N 0.712
Bra040421 Brassica rapa Bra040421 N 0.712
GLYMA02G16930 Glycine max GLYMA02G16930 N 0.703
GLYMA10G02860 Glycine max GLYMA10G02860 N 0.703
Eucgr.H01546 Eucalyptus grandis Eucgr.H01546 N 0.703
chr5.CM0909.10.nc Lotus japonicus chr5.CM0909.10.nc N 0.703