Thhalv10001805m.g (Eutrema salsugineum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Thhalv10001805m.g T261629_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10001805m MBD 79 152

Links

Other MBD family TFs
Other Eutrema salsugineum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.946
MBD1 Arabidopsis lyrata scaffold_702078.1 N 0.919
MBD1 Arabidopsis thaliana AT4G22745 N 0.905
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.878
MBD4 Arabidopsis thaliana AT3G63030 N 0.865
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.865
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.851
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.851
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N 0.838
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 0.838
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N 0.838
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.811
29703.m001533 Ricinus communis 29703.m001533 N 0.811
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.811
Bo8g098350 Brassica oleracea Bo8g098350 N 0.797
Bra007723 Brassica rapa Bra007723 N 0.797
Bra040421 Brassica rapa Bra040421 N 0.797
Lus10008176.g Linum usitatissimum Lus10008176.g N 0.797
Bo4g098290 Brassica oleracea Bo4g098290 N 0.784
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.784
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.784
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.770
Lus10029631.g Linum usitatissimum Lus10029631.g N 0.770
Lus10042674.g Linum usitatissimum Lus10042674.g N 0.757
GLYMA02G16930 Glycine max GLYMA02G16930 N 0.730
GLYMA10G02860 Glycine max GLYMA10G02860 N 0.730
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N 0.730
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 0.730
Carubv10007419m.g Capsella rubella Carubv10007419m.g N 0.716
Pm019897 Prunus mume Pm019897 N 0.703
Cagra.1636s0011 Capsella grandiflora Cagra.1636s0011 N 0.703
SapurV1A.0633s0290 Salix purpurea SapurV1A.0633s0290 N 0.703
SapurV1A.0633s0300 Salix purpurea SapurV1A.0633s0300 N 0.703
LjSGA_013286.1 Lotus japonicus LjSGA_013286.1 N 0.703