CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J28752
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.J28752
T265106_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J28752.1.p
mTERF
207
361
VVYLLDLGMDHEEIKNIVRKFPAFAYYNVDRKIKPLVELLLDLGVPRSSIPGIIRKRPQLCGISMSDNLKPMMAYLENIGVNRAQWSKVLTRFPAFLTYSRNKVETTVSFLTELGVSKKNIGKILTRCPHIMSYSVDDNLRPTAEYFRSIGADAA
Pavir.J28752.1.p
mTERF
304
475
TYSRNKVETTVSFLTELGVSKKNIGKILTRCPHIMSYSVDDNLRPTAEYFRSIGADAASLIQKSPQAFGLNVEAKLKPITEFFLAREFSIEEIGIMVNRFGIIHTLSLEENLLPKYEFFLTMEYPRSELVKFPQYFGYSLEQRIKPRYAQMTASGVRLILNQMLSVSDARFE
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ab02219
Panicum virgatum
Pavir.Ab02219
N
0.991
Sb04g025195
Sorghum bicolor
Sb04g025195
N
0.935
GRMZM2G024550
Zea mays
GRMZM2G024550
N
0.882
OLONG_019354
Oryza longistaminata
OLONG_019354
N
0.867
ORGLA02G0199200
Oryza glaberrima
ORGLA02G0199200
N
0.818