CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A1O7_08460
(
Cladophialophora yegresii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
A1O7_08460
T265938_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.715
0.815
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.715
0.815
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.707
0.783
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXJ55532
Myb
6
52
GGVWTNIEDEILKASVSKYGLNQWARVSSLLARKTPKQCKARWTEWL
EXJ55532
Myb
58
102
KIEWSKEEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLL
Links
Other
Myb/SANT
family TFs
Other
Cladophialophora yegresii
TFs
543 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA023255
Oryza indica
BGIOSGA023255
N
BRADI1G36180
Brachypodium distachyon
BRADI1G36180
N
GRMZM2G114680
Zea mays
GRMZM2G114680
N
MLOC_76302
Hordeum vulgare
MLOC_76302
N
OGLUM06G21860
Oryza glumaepatula
OGLUM06G21860
N
OMERI06G21310
Oryza meridionalis
OMERI06G21310
N
ONIVA06G24530
Oryza nivara
ONIVA06G24530
N
OPUNC06G18940
Oryza punctata
OPUNC06G18940
N
ORGLA06G0172100
Oryza glaberrima
ORGLA06G0172100
N
ORUFI06G22200
Oryza rufipogon
ORUFI06G22200
N
Si008068m.g
Setaria italica
Si008068m.g
N
Pavir.Da00564
Panicum virgatum
Pavir.Da00564
N