MYB80 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT5G56110 T266568_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a member of the R2R3 MYB transcription factor gene family that is required for anther development by regulation tapetum development, callose dissolution and exine formation. It acts upstream of MS2.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB80
M07142_2.00
Arabidopsis thaliana
NYYYACCTAMYWHNN

NNDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MS188_col_a
(Direct) (Direct)
MYB80
M07143_2.00
Arabidopsis thaliana
YYYACCTAMYTWNNN

NNNWARKTAGGTRRR
Dap-seq
OMalley et al.(2016)
MS188_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G56110.1 Myb 14 61
AT5G56110.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10027619m.g Capsella rubella Carubv10027619m.g I 0.909
Al_scaffold_0008_2049 Arabidopsis lyrata Al_scaffold_0008_2049 I 0.909
Bra002847 Brassica rapa Bra002847 I 0.909
Cagra.3745s0008 Capsella grandiflora Cagra.3745s0008 I 0.909
Thhalv10015622m.g Eutrema salsugineum Thhalv10015622m.g I 0.909
AtMYB103 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001268 I 0.905
Bostr.26833s0652 Boechera stricta Bostr.26833s0652 I 0.900
Bo9g123440 Brassica oleracea Bo9g123440 I 0.898
Bra035604 Brassica rapa Bra035604 I 0.892
Bo2g036530 Brassica oleracea Bo2g036530 I 0.872
evm.TU.supercontig_12.83 Carica papaya evm.TU.supercontig_12.83 I 0.857
TCM_030529 Theobroma cacao TCM_030529 I 0.849
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I 0.841
Eucgr.F03656 Eucalyptus grandis Eucgr.F03656 I 0.836
Aquca_005_00315 Aquilegia coerulea Aquca_005_00315 I 0.834
Cucsa.041880 Cucumis sativus Cucsa.041880 I 0.832
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I 0.832
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I 0.832
AtMYB103 Vitis vinifera VIT_19s0015g01280 I 0.832
Ca_17657 Cicer arietinum Ca_17657 I 0.832
cassava33918.m1 Manihot esculenta cassava33918.m1 I 0.832
SapurV1A.0338s0180 Salix purpurea SapurV1A.0338s0180 I 0.832
GLYMA18G07960 Glycine max GLYMA18G07960 I 0.832
Solyc10g005760.1 Solanum lycopersicum Solyc10g005760.1 I 0.831
PGSC0003DMG400008687 Solanum tuberosum PGSC0003DMG400008687 I 0.831
SapurV1A.0395s0050 Salix purpurea SapurV1A.0395s0050 I 0.830
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I 0.825
LPERR04G12420 Leersia perrieri LPERR04G12420 I 0.823
Cla004524 Citrullus lanatus Cla004524 I 0.821
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I 0.818
MTR_3g461490 Medicago truncatula MTR_3g461490 I 0.817
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I 0.814
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I 0.814
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I 0.814
TRIUR3_35325 Triticum urartu TRIUR3_35325 I 0.814
Si012130m.g Setaria italica Si012130m.g I 0.814
Sb06g019650 Sorghum bicolor Sb06g019650 I 0.814
ONIVA04G13800 Oryza nivara ONIVA04G13800 I 0.814
OPUNC04G13560 Oryza punctata OPUNC04G13560 I 0.814
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I 0.814
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I 0.814
OB04G23000 Oryza brachyantha OB04G23000 I 0.814
F775_22620 Aegilops tauschii F775_22620 I 0.814
GRMZM2G173633 Zea mays GRMZM2G173633 I 0.814
BGIOSGA014912 Oryza indica BGIOSGA014912 I 0.814
OMERI04G13500 Oryza meridionalis OMERI04G13500 I 0.814
POPTR_0001s47430 Populus trichocarpa POPTR_0001s47430 I 0.812
BGIOSGA030830 Oryza indica BGIOSGA030830 I 0.794
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I 0.792
Traes_2DL_A03AB7608 Triticum aestivum Traes_2DL_A03AB7608 I 0.769
Pavir.J28142 Panicum virgatum Pavir.J28142 I 0.698
Pavir.J07059 Panicum virgatum Pavir.J07059 I 0.695
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.692
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.688
GLYMA19G36830 Glycine max GLYMA19G36830 I 0.688
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.688
MDP0000124992 Malus domestica MDP0000124992 I 0.684
MDP0000786507 Malus domestica MDP0000786507 I 0.684
MDP0000262514 Malus domestica MDP0000262514 I 0.684
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.684
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.683
GSMUA_Achr5G01930_001 Musa acuminata GSMUA_Achr5G01930_001 I 0.683
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.677
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.677
OB03G42660 Oryza brachyantha OB03G42660 I 0.676
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.673
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.673
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.673
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.673
Cucsa.353120 Cucumis sativus Cucsa.353120 I 0.673
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.673
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.673
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.673
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.673
Si036681m.g Setaria italica Si036681m.g I 0.673
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.673
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.673
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.673
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.673
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.673
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.673
OBART03G35660 Oryza barthii OBART03G35660 I 0.673
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.673
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.673
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.673
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.673
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.673
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.673
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.673
OS03G0771100 Oryza sativa OS03G0771100 I 0.673
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.673
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.673
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.673
Ca_02249 Cicer arietinum Ca_02249 I 0.673
Ca_09203 Cicer arietinum Ca_09203 I 0.673
Cla021213 Citrullus lanatus Cla021213 I 0.673
Cla014272 Citrullus lanatus Cla014272 I 0.673
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.673
TCM_034634 Theobroma cacao TCM_034634 I 0.673
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.673
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.673
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I 0.671
PGSC0003DMG400021401 Solanum tuberosum PGSC0003DMG400021401 I 0.667
Solyc02g091980.1 Solanum lycopersicum Solyc02g091980.1 I 0.667
Lus10011606.g Linum usitatissimum Lus10011606.g I 0.665
Lus10013830.g Linum usitatissimum Lus10013830.g I 0.665
Lus10026543.g Linum usitatissimum Lus10026543.g I 0.665
Thhalv10010576m.g Eutrema salsugineum Thhalv10010576m.g I 0.665
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.664
evm.TU.supercontig_160.24 Carica papaya evm.TU.supercontig_160.24 I 0.664
Aquca_001_00247 Aquilegia coerulea Aquca_001_00247 I 0.662
Gorai.006G162800 Gossypium raimondii Gorai.006G162800 I 0.661