BGIOSGA008860 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA008860 T266787_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.856 0.935
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.856 0.935
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.822 0.935
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.822 0.935
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.733 0.848
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA008860-PA Myb 197 247

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

338 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000642 Ricinus communis 27613.m000642 N
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N
BGIOSGA026022 Oryza indica BGIOSGA026022 N
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N
CIGR2 Oryza sativa OS07G0583600 N
F775_15940 Aegilops tauschii F775_15940 N
GRMZM2G098517 Zea mays GRMZM2G098517 N
GRMZM2G431309 Zea mays GRMZM2G431309 N
LPERR07G17460 Leersia perrieri LPERR07G17460 N
MLOC_65838 Hordeum vulgare MLOC_65838 N
OB07G25870 Oryza brachyantha OB07G25870 N
OBART07G20130 Oryza barthii OBART07G20130 N
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N
OMERI07G16830 Oryza meridionalis OMERI07G16830 N
ONIVA07G18570 Oryza nivara ONIVA07G18570 N
OPUNC07G19030 Oryza punctata OPUNC07G19030 N
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N
Pavir.Bb03224 Panicum virgatum Pavir.Bb03224 N
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N
Pm015021 Prunus mume Pm015021 N
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N
Sb02g037650 Sorghum bicolor Sb02g037650 N
Si029418m.g Setaria italica Si029418m.g N
TCM_002319 Theobroma cacao TCM_002319 N
TCM_030733 Theobroma cacao TCM_030733 N
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N
Traes_5AL_886E8DACD Triticum aestivum Traes_5AL_886E8DACD N
Traes_5BL_1E751EF1F Triticum aestivum Traes_5BL_1E751EF1F N
Traes_5BL_A7C4DAE11 Triticum aestivum Traes_5BL_A7C4DAE11 N
Traes_5DL_B89CD8432 Triticum aestivum Traes_5DL_B89CD8432 N