Bo15369s010 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo15369s010 T267054_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.722 0.895
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.722 0.895
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo15369s010.1 Myb 7 53
Bo15369s010.1 Myb 59 97

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g021720 Brassica oleracea Bo1g021720 I 0.852
Bo9g044140 Brassica oleracea Bo9g044140 I 0.837
Bra027160 Brassica rapa Bra027160 I 0.809
estExt_Genewise1.C_230192 Bigelowiella natans estExt_Genewise1.C_230192 I 0.724
AC203535.4_FG001 Zea mays AC203535.4_FG001 I 0.722
AMTR_s00067p00056670 Amborella trichopoda AMTR_s00067p00056670 I 0.722
CDC5 Arabidopsis thaliana AT1G09770 D 0.722
Bo5g010170 Brassica oleracea Bo5g010170 I 0.722
Bo8g058860 Brassica oleracea Bo8g058860 I 0.722
Bra019993 Brassica rapa Bra019993 I 0.722
Bra030798 Brassica rapa Bra030798 I 0.722
BRADI4G07110 Brachypodium distachyon BRADI4G07110 I 0.722
F775_02173 Aegilops tauschii F775_02173 I 0.722
ATCDC5 Arabidopsis lyrata fgenesh2_kg.1__1032__AT1G09770.1 I 0.722
GLYMA10G30870 Glycine max GLYMA10G30870 I 0.722
GLYMA20G36600 Glycine max GLYMA20G36600 I 0.722
GSMUA_Achr9G23340_001 Musa acuminata GSMUA_Achr9G23340_001 I 0.722
LPERR04G05540 Leersia perrieri LPERR04G05540 I 0.722
MTR_7g115550 Medicago truncatula MTR_7g115550 I 0.722
OB04G16480 Oryza brachyantha OB04G16480 I 0.722
OBART04G08350 Oryza barthii OBART04G08350 I 0.722
OGLUM04G08300 Oryza glumaepatula OGLUM04G08300 I 0.722
OLONG_016730 Oryza longistaminata OLONG_016730 I 0.722
OMERI04G07710 Oryza meridionalis OMERI04G07710 I 0.722
ONIVA04G06780 Oryza nivara ONIVA04G06780 I 0.722
OPUNC04G06960 Oryza punctata OPUNC04G06960 I 0.722
ORUFI04G09590 Oryza rufipogon ORUFI04G09590 I 0.722
OS04G0348300 Oryza sativa OS04G0348300 I 0.722
PGSC0003DMG400011500 Solanum tuberosum PGSC0003DMG400011500 I 0.722
POPTR_0013s04340 Populus trichocarpa POPTR_0013s04340 I 0.722
POPTR_0019s03520 Populus trichocarpa POPTR_0019s03520 I 0.722
PRUPE_ppa000753mg Prunus persica PRUPE_ppa000753mg I 0.722
Sb03g044450 Sorghum bicolor Sb03g044450 I 0.722
Sb08g015280 Sorghum bicolor Sb08g015280 I 0.722
Si009268m.g Setaria italica Si009268m.g I 0.722
Si021096m.g Setaria italica Si021096m.g I 0.722
Solyc04g009950.2 Solanum lycopersicum Solyc04g009950.2 I 0.722
TCM_026195 Theobroma cacao TCM_026195 I 0.722
TRIUR3_09033 Triticum urartu TRIUR3_09033 I 0.722
TRIUR3_30901 Triticum urartu TRIUR3_30901 I 0.722
Ca_01258 Cicer arietinum Ca_01258 I 0.722
Cla000798 Citrullus lanatus Cla000798 I 0.722
Pm003587 Prunus mume Pm003587 I 0.722
29680.m001688 Ricinus communis 29680.m001688 I 0.722
cassava44087.valid.m1 Manihot esculenta cassava44087.valid.m1 I 0.722
cassava4988.m1 Manihot esculenta cassava4988.m1 I 0.722
Cucsa.106050 Cucumis sativus Cucsa.106050 I 0.722
Cucsa.291780 Cucumis sativus Cucsa.291780 I 0.722
mgf002270m Mimulus guttatus mgf002270m I 0.722
Aquca_034_00352 Aquilegia coerulea Aquca_034_00352 I 0.722
Bostr.25494s0035 Boechera stricta Bostr.25494s0035 I 0.722
Cagra.4395s0161 Capsella grandiflora Cagra.4395s0161 I 0.722
Carubv10008427m.g Capsella rubella Carubv10008427m.g I 0.722
Ciclev10018691m.g Citrus clementina Ciclev10018691m.g I 0.722
Eucgr.B01570 Eucalyptus grandis Eucgr.B01570 I 0.722
evm.TU.supercontig_306.1 Carica papaya evm.TU.supercontig_306.1 I 0.722
Gorai.007G276500 Gossypium raimondii Gorai.007G276500 I 0.722
Gorai.013G187200 Gossypium raimondii Gorai.013G187200 I 0.722
Lus10034133.g Linum usitatissimum Lus10034133.g I 0.722
Lus10043451.g Linum usitatissimum Lus10043451.g I 0.722
MDP0000151195 Malus domestica MDP0000151195 I 0.722
MDP0000191083 Malus domestica MDP0000191083 I 0.722
MDP0000878701 Malus domestica MDP0000878701 I 0.722
orange1.1g047012m.g Citrus sinensis orange1.1g047012m.g I 0.722
Pavir.Ca02612 Panicum virgatum Pavir.Ca02612 I 0.722
Pavir.Ga02351 Panicum virgatum Pavir.Ga02351 I 0.722
Pavir.J36679 Panicum virgatum Pavir.J36679 I 0.722
SapurV1A.0309s0270 Salix purpurea SapurV1A.0309s0270 I 0.722
SapurV1A.0483s0120 Salix purpurea SapurV1A.0483s0120 I 0.722
SapurV1A.0816s0150 Salix purpurea SapurV1A.0816s0150 I 0.722
Thhalv10006800m.g Eutrema salsugineum Thhalv10006800m.g I 0.722
PK01704.1 Cannabis sativa PK01704.1 I 0.722
chr1.CM0600.100.nd Lotus japonicus chr1.CM0600.100.nd I 0.722
CY34DRAFT_800080 Suillus luteus CY34DRAFT_800080 I 0.714
Thhalv10001097m.g Eutrema salsugineum Thhalv10001097m.g I 0.713
BGIOSGA016164 Oryza indica BGIOSGA016164 I 0.712
gene16655-v1.0-hybrid Fragaria vesca gene16655-v1.0-hybrid I 0.712
F775_07681 Aegilops tauschii F775_07681 I 0.710
e_gw1.05.00.32.1 Ostreococcus tauri e_gw1.05.00.32.1 I 0.703
SELMODRAFT_179572 Selaginella moellendorffii SELMODRAFT_179572 I 0.702
SELMODRAFT_233652 Selaginella moellendorffii SELMODRAFT_233652 I 0.702
estExt_Genewise1Plus.C_20699 Micromonas pusilla estExt_Genewise1Plus.C_20699 I 0.702
e_gw2.01.888.1 Micromonas sp RCC299 e_gw2.01.888.1 I 0.702
estExt_Genewise2Plus.C_Chr_010477 Micromonas sp RCC299 estExt_Genewise2Plus.C_Chr_010477 I 0.702
GLOINDRAFT_187386 Rhizophagus irregularis GLOINDRAFT_187386 I 0.699
OSTLU_31513 Ostreococcus lucimarinus OSTLU_31513 I 0.697
estExt_Genewise1.C_6410001 Physcomitrella patens estExt_Genewise1.C_6410001 I 0.697
e_gw1.5.42.1 Ostreococcus RCC809 e_gw1.5.42.1 I 0.692
D918_02148 Trichuris suis D918_02148 I 0.688
TMUE_s0089002900 Trichuris muris TMUE_s0089002900 I 0.688
TTRE_0000616501 Trichuris trichiura TTRE_0000616501 I 0.688
GUITHDRAFT_164718 Guillardia theta GUITHDRAFT_164718 I 0.684
BXY_0883400 Bursaphelenchus xylophilus BXY_0883400 I 0.684
MhA1_Contig70.frz3.gene35 Meloidogyne hapla MhA1_Contig70.frz3.gene35 I 0.684
PTRK_0001004600 Parastrongyloides trichosuri PTRK_0001004600 I 0.684
SPAL_0001703200 Strongyloides papillosus SPAL_0001703200 I 0.684
SSTP_0000058200 Strongyloides stercoralis SSTP_0000058200 I 0.684
SVE_1909000 Strongyloides venezuelensis SVE_1909000 I 0.684
PHLGIDRAFT_130624 Phlebiopsis gigantea PHLGIDRAFT_130624 I 0.683
AGABI2DRAFT_190684 Agaricus bisporus AGABI2DRAFT_190684 I 0.678
BN946_scf184834.g3 Trametes cinnabarina BN946_scf184834.g3 I 0.678
BOTBODRAFT_134736 Botryobasidium botryosum BOTBODRAFT_134736 I 0.678
CC1G_11763 Coprinopsis cinerea CC1G_11763 I 0.678
CERSUDRAFT_117334 Ceriporiopsis subvermispora CERSUDRAFT_117334 I 0.678
EMIHUDRAFT_357624 Emiliania huxleyi EMIHUDRAFT_357624 I 0.678
EMIHUDRAFT_443602 Emiliania huxleyi EMIHUDRAFT_443602 I 0.678
FIBRA_08343 Fibroporia radiculosa FIBRA_08343 I 0.678
FOMPIDRAFT_1160973 Fomitopsis pinicola FOMPIDRAFT_1160973 I 0.678
GALMADRAFT_134801 Galerina marginata GALMADRAFT_134801 I 0.678
GLOTRDRAFT_57556 Gloeophyllum trabeum GLOTRDRAFT_57556 I 0.678
GYMLUDRAFT_40917 Gymnopus luxurians GYMLUDRAFT_40917 I 0.678
K443DRAFT_580008 Laccaria amethystina K443DRAFT_580008 I 0.678
LACBIDRAFT_179365 Laccaria bicolor LACBIDRAFT_179365 I 0.678
M378DRAFT_71748 Amanita muscaria M378DRAFT_71748 I 0.678
M407DRAFT_22652 Tulasnella calospora M407DRAFT_22652 I 0.678
Moror_14741 Moniliophthora roreri Moror_14741 I 0.678
PHACADRAFT_28828 Phanerochaete carnosa PHACADRAFT_28828 I 0.678
PILCRDRAFT_9339 Piloderma croceum PILCRDRAFT_9339 I 0.678
PISMIDRAFT_8042 Pisolithus microcarpus PISMIDRAFT_8042 I 0.678
PLEOSDRAFT_172359 Pleurotus ostreatus PLEOSDRAFT_172359 I 0.678
SCHCODRAFT_65704 Schizophyllum commune SCHCODRAFT_65704 I 0.678
SCLCIDRAFT_19504 Scleroderma citrinum SCLCIDRAFT_19504 I 0.678
V565_076900 Rhizoctonia solani V565_076900 I 0.678
e_gww2.1.121.1 Phanerochaete chrysosporium e_gww2.1.121.1 I 0.678
estExt_fgeneshPB_pm.C_510007 Phycomyces blakesleeanus estExt_fgeneshPB_pm.C_510007 I 0.678
RO3G_03369 Rhizopus oryzae RO3G_03369 I 0.677
MVLG_03555 Microbotryum violaceum MVLG_03555 I 0.677
estExt_fgeneshMC_pg.C_41203 Mucor circinelloides estExt_fgeneshMC_pg.C_41203 I 0.677
estExt_Genewise1.C_90338 Tremella mesenterica estExt_Genewise1.C_90338 I 0.677
L889_g26583 Steinernema feltiae L889_g26583 I 0.677
MCINX004224 Melitaea cinxia MCINX004224 I 0.675
ACYPI009806 Acyrthosiphon pisum ACYPI009806 I 0.674
D917_09643 Trichinella nativa D917_09643 I 0.674
HETIRDRAFT_379594 Heterobasidion irregulare HETIRDRAFT_379594 I 0.673
estExt_Genewise1Plus.C_21372 Heterobasidion annosum estExt_Genewise1Plus.C_21372 I 0.673
SELMODRAFT_113921 Selaginella moellendorffii SELMODRAFT_113921 I 0.671
SELMODRAFT_116436 Selaginella moellendorffii SELMODRAFT_116436 I 0.671
SELMODRAFT_420607 Selaginella moellendorffii SELMODRAFT_420607 I 0.670
JAAARDRAFT_56409 Jaapia argillacea JAAARDRAFT_56409 I 0.668
M404DRAFT_163827 Pisolithus tinctorius M404DRAFT_163827 I 0.668
M408DRAFT_329933 Serendipita vermifera M408DRAFT_329933 I 0.668
M422DRAFT_60924 Sphaerobolus stellatus M422DRAFT_60924 I 0.668
PIIN_00332 Piriformospora indica PIIN_00332 I 0.668
DACRYDRAFT_20015 Dacryopinax sp DACRYDRAFT_20015 I 0.667
PNEG_02751 Pneumocystis murina PNEG_02751 I 0.663
PredSwiss_ASS2010_2520.1 Pneumocystis carinii PredSwiss_ASS2010_2520.1 I 0.663
ENSMODG00000003702 Monodelphis domestica ENSMODG00000003702 I 0.662
ENSMODG00000003716 Monodelphis domestica ENSMODG00000003716 I 0.662