CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo3g062020
(
Brassica oleracea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bo3g062020
T267253_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g062020.1
Myb
1319
1364
AGWTTEEDEILRQGVCRFKAKSWKKVAEFLPDRTEVQCMHRWQKVL
Bo3g062020.1
Myb
1370
1416
KGHWTQQEDETIVELVEKYGPKKWSLISQSLPGRIGKQCRERWYNHL
Bo3g062020.1
Myb
1422
1467
KEAWTPEEELALLNAHVIYGNKWAEIAKVLPGRTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Brassica oleracea
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29794.m003447
Ricinus communis
29794.m003447
I
0.677
29846.m000184
Ricinus communis
29846.m000184
I
0.719
AMTR_s00012p00208260
Amborella trichopoda
AMTR_s00012p00208260
I
0.662
MYB3R-3
Arabidopsis thaliana
AT3G09370
I
0.677
Bo1g144510
Brassica oleracea
Bo1g144510
I
0.727
Bo5g139340
Brassica oleracea
Bo5g139340
I
0.748
Bostr.22252s0130
Boechera stricta
Bostr.22252s0130
I
0.702
Bra001311
Brassica rapa
Bra001311
N
0.841
Bra029762
Brassica rapa
Bra029762
I
0.747
Bra034067
Brassica rapa
Bra034067
I
0.727
BRADI2G54640
Brachypodium distachyon
BRADI2G54640
I
0.668
Cagra.0487s0012
Capsella grandiflora
Cagra.0487s0012
I
0.677
Cagra.2515s0028
Capsella grandiflora
Cagra.2515s0028
I
0.684
Carubv10000643m.g
Capsella rubella
Carubv10000643m.g
I
0.677
Carubv10013377m.g
Capsella rubella
Carubv10013377m.g
I
0.684
cassava12645.valid.m1
Manihot esculenta
cassava12645.valid.m1
I
0.691
chr1.CM0147.520.nd
Lotus japonicus
chr1.CM0147.520.nd
I
0.703
Ciclev10011452m.g
Citrus clementina
Ciclev10011452m.g
I
0.725
Eucgr.K03133
Eucalyptus grandis
Eucgr.K03133
I
0.679
evm.TU.supercontig_228.17
Carica papaya
evm.TU.supercontig_228.17
I
0.685
fgenesh1_pg.C_scaffold_3000839
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000839
I
0.695
GLYMA07G15820
Glycine max
GLYMA07G15820
I
0.701
GLYMA18G39740
Glycine max
GLYMA18G39740
I
0.685
Gorai.001G249400
Gossypium raimondii
Gorai.001G249400
I
0.692
Gorai.006G172800
Gossypium raimondii
Gorai.006G172800
I
0.707
GRMZM2G081919
Zea mays
GRMZM2G081919
I
0.667
GSMUA_Achr10G26610_001
Musa acuminata
GSMUA_Achr10G26610_001
I
0.701
LPERR01G31650
Leersia perrieri
LPERR01G31650
I
0.685
Lus10024394.g
Linum usitatissimum
Lus10024394.g
I
0.684
Lus10025351.g
Linum usitatissimum
Lus10025351.g
I
0.684
MDP0000219581
Malus domestica
MDP0000219581
I
0.687
MTR_7g061330
Medicago truncatula
MTR_7g061330
I
0.669
MTR_7g461410
Medicago truncatula
MTR_7g461410
I
0.669
OGLUM01G40780
Oryza glumaepatula
OGLUM01G40780
I
0.667
orange1.1g009402m.g
Citrus sinensis
orange1.1g009402m.g
I
0.725
ORGLA01G0306500
Oryza glaberrima
ORGLA01G0306500
I
0.667
MYB3R-2
Oryza sativa
OS01G0841500
I
0.667
Pm002704
Prunus mume
Pm002704
I
0.712
POPTR_0006s08570
Populus trichocarpa
POPTR_0006s08570
I
0.721
PRUPE_ppa003208mg
Prunus persica
PRUPE_ppa003208mg
I
0.712
SapurV1A.0001s1810
Salix purpurea
SapurV1A.0001s1810
I
0.719
Sb03g039470
Sorghum bicolor
Sb03g039470
I
0.661
TCM_021936
Theobroma cacao
TCM_021936
I
0.692
Thhalv10013211m.g
Eutrema salsugineum
Thhalv10013211m.g
I
0.686
Thhalv10020579m.g
Eutrema salsugineum
Thhalv10020579m.g
I
0.748
TRAES3BF104600030CFD_g
Triticum aestivum
TRAES3BF104600030CFD_g
I
0.695
Traes_3AL_386795528
Triticum aestivum
Traes_3AL_386795528
I
0.695
Traes_3DL_6BBC889A1
Triticum aestivum
Traes_3DL_6BBC889A1
I
0.695
VIT_08s0007g00360
Vitis vinifera
VIT_08s0007g00360
I
0.699