CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo7g115520
(
Brassica oleracea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bo7g115520
T267527_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR10
M02702_2.00
Arabidopsis thaliana
AGATHYKN
NMRDATCT
SELEX
Mathelier et al.(2014)
MA0121.1
0.779
0.957
ARR10
M11045_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ARR10_01
0.779
0.957
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g115520.1
Myb
194
244
RVLWTRELHNKFLAAVDHLGVEKAQPKKILDLMNVDKLTRENVASHLQKFR
Links
Other
Myb/SANT
family TFs
Other
Brassica oleracea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra023972
Brassica rapa
Bra023972
I
0.901
Thhalv10024866m.g
Eutrema salsugineum
Thhalv10024866m.g
I
0.813
ARR10
Arabidopsis lyrata
Al_scaffold_0007_907
I
0.779
ARR10
Arabidopsis thaliana
AT4G31920
D
0.779
Bostr.7867s1047
Boechera stricta
Bostr.7867s1047
I
0.779
Cagra.3807s0064
Capsella grandiflora
Cagra.3807s0064
I
0.748
Carubv10004554m.g
Capsella rubella
Carubv10004554m.g
I
0.748
Ca_09080
Cicer arietinum
Ca_09080
I
0.702
Lus10005340.g
Linum usitatissimum
Lus10005340.g
I
0.702
Lus10041020.g
Linum usitatissimum
Lus10041020.g
I
0.702
Bo1g010830
Brassica oleracea
Bo1g010830
I
0.666