Bra003443 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra003443 T267721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.804 0.892
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.715 0.710
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.715 0.710
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.702 0.753
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.686 0.699
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.686 0.699
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.673 0.710
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.664 0.688
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.664 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003443.1-P Myb 14 61
Bra003443.1-P Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

622 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF205 Homo sapiens ENSG00000122386 D
ZNF205 Pteropus vampyrus ENSPVAG00000001475 I
ENSNLEG00000009600 Nomascus leucogenys ENSNLEG00000009600 I
ENSOARG00000001319 Ovis aries ENSOARG00000001319 I
ZNF205 Otolemur garnettii ENSOGAG00000003693 I
ZNF205 Ochotona princeps ENSOPRG00000005820 I
ENSPANG00000024398 Papio anubis ENSPANG00000024398 I
ENSPPYG00000007034 Pongo abelii ENSPPYG00000007034 I
ZNF205 Pan troglodytes ENSPTRG00000007686 I
Zfp13 Mus musculus ENSMUSG00000062012 I
Zfp13 Rattus norvegicus ENSRNOG00000003455 I
ZNF205 Sorex araneus ENSSARG00000006551 I
ZNF205 Sus scrofa ENSSSCG00000029375 I
ENSSTOG00000003803 Ictidomys tridecemlineatus ENSSTOG00000003803 I
ENSBTAP00000007323-D1 Bos grunniens ENSBTAP00000007323-D1 I
ENSP00000219091 Macaca fascicularis ENSP00000219091 I
Myotis_brandtii_ZNF205_10028065 Myotis brandtii Myotis_brandtii_ZNF205_10028065 I
ENSAMEG00000010576 Ailuropoda melanoleuca ENSAMEG00000010576 I
ENSMPUG00000015184 Mustela putorius furo ENSMPUG00000015184 I
ZNF205 Macaca mulatta ENSMMUG00000009487 I
ZNF205 Microcebus murinus ENSMICG00000009089 I
ENSMEUG00000004328 Macropus eugenii ENSMEUG00000004328 I
ZNF205 Loxodonta africana ENSLAFG00000021564 I
ZNF205 Gorilla gorilla ENSGGOG00000012036 I
ZNF205 Felis catus ENSFCAG00000026028 I
ENSETEG00000002476 Echinops telfairi ENSETEG00000002476 I
ZNF205 Erinaceus europaeus ENSEEUG00000010049 I
ZNF205 Equus caballus ENSECAG00000009869 I
ZNF205 Dasypus novemcinctus ENSDNOG00000037994 I
ZNF205 Callithrix jacchus ENSCJAG00000015546 I
ZNF205 Canis familiaris ENSCAFG00000023869 I
ZNF205 Bos taurus ENSBTAG00000005572 I