Bra003871 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra003871 T267727_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003871.1-P Myb 496 546

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra003870 Brassica rapa Bra003870 N 0.909
Bo6g091360 Brassica oleracea Bo6g091360 N 0.901
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N 0.813
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N 0.795
Cucsa.360310 Cucumis sativus Cucsa.360310 N 0.795
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N 0.795
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N 0.795
Carubv10019876m.g Capsella rubella Carubv10019876m.g N 0.795
Bra016044 Brassica rapa Bra016044 N 0.784
TRFL6 Arabidopsis thaliana AT1G72650 N 0.768
Lus10015664.g Linum usitatissimum Lus10015664.g N 0.716
Lus10037678.g Linum usitatissimum Lus10037678.g N 0.716
GRMZM2G049194 Zea mays GRMZM2G049194 N 0.705
Sb04g034770 Sorghum bicolor Sb04g034770 N 0.705
Si016649m.g Setaria italica Si016649m.g N 0.705
Pavir.Aa00316 Panicum virgatum Pavir.Aa00316 N 0.705
Pavir.J06110 Panicum virgatum Pavir.J06110 N 0.705
Bra025973 Brassica rapa Bra025973 N 0.702
Cla015802 Citrullus lanatus Cla015802 N 0.699
Bo5g023810 Brassica oleracea Bo5g023810 N 0.694
BGIOSGA009134 Oryza indica BGIOSGA009134 N 0.687
LPERR02G28410 Leersia perrieri LPERR02G28410 N 0.687
OB02G41350 Oryza brachyantha OB02G41350 N 0.687
OBART02G34530 Oryza barthii OBART02G34530 N 0.687
OGLUM02G35670 Oryza glumaepatula OGLUM02G35670 N 0.687
ONIVA02G36570 Oryza nivara ONIVA02G36570 N 0.687
ORGLA02G0298600 Oryza glaberrima ORGLA02G0298600 N 0.687
ORUFI02G36040 Oryza rufipogon ORUFI02G36040 N 0.687
OS02G0776700 Oryza sativa OS02G0776700 N 0.687
TCM_029115 Theobroma cacao TCM_029115 N 0.682
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N 0.682
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N 0.682
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N 0.682
PK02666.1 Cannabis sativa PK02666.1 N 0.682
GSMUA_Achr5G24660_001 Musa acuminata GSMUA_Achr5G24660_001 N 0.681
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N 0.678
Carubv10012426m.g Capsella rubella Carubv10012426m.g N 0.678
Aquca_076_00106 Aquilegia coerulea Aquca_076_00106 N 0.672