CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra020744
(
Brassica rapa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bra020744
T267930_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.841
0.925
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra020744.1-P
Myb
31
78
KGPWTPAEDKLLTEYVTSNGEGKWSSVAKCAGLNRSGKSCRLRWVNYL
Bra020744.1-P
Myb
84
129
RGQITPQEEGIILELHFLWGNKWSTIARYLPGRTDNEIKNYWRTHY
Links
Other
Myb/SANT
family TFs
Other
Brassica rapa
TFs
227 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28226.m000839
Ricinus communis
28226.m000839
I
0.665
AMTR_s00024p00250970
Amborella trichopoda
AMTR_s00024p00250970
I
0.673
Aquca_002_00902
Aquilegia coerulea
Aquca_002_00902
I
0.715
Aquca_003_00309
Aquilegia coerulea
Aquca_003_00309
I
0.668
Aquca_025_00059
Aquilegia coerulea
Aquca_025_00059
I
0.674
MYB305
Arabidopsis thaliana
AT3G24310
I
0.710
ATMYB121
Arabidopsis thaliana
AT3G30210
D
0.841
AtMYB79
Arabidopsis thaliana
AT4G13480
I
0.709
BGIOSGA006030
Oryza indica
BGIOSGA006030
I
0.709
BGIOSGA011479
Oryza indica
BGIOSGA011479
I
0.673
BGIOSGA014750
Oryza indica
BGIOSGA014750
I
0.695
Bo1g098860
Brassica oleracea
Bo1g098860
I
0.710
Bo3g083130
Brassica oleracea
Bo3g083130
I
0.710
Bo7g033260
Brassica oleracea
Bo7g033260
I
0.714
Bo7g088650
Brassica oleracea
Bo7g088650
I
0.858
Bo9g009020
Brassica oleracea
Bo9g009020
I
0.849
Bostr.0556s0619
Boechera stricta
Bostr.0556s0619
I
0.841
Bostr.19424s0195
Boechera stricta
Bostr.19424s0195
I
0.710
Bostr.2021s0106
Boechera stricta
Bostr.2021s0106
I
0.710
Bra001941
Brassica rapa
Bra001941
I
0.710
Bra015029
Brassica rapa
Bra015029
I
0.714
Bra025410
Brassica rapa
Bra025410
I
0.858
Bra028369
Brassica rapa
Bra028369
I
0.710
Bra036202
Brassica rapa
Bra036202
I
0.826
Cagra.0454s0003
Capsella grandiflora
Cagra.0454s0003
I
0.710
Cagra.1111s0025
Capsella grandiflora
Cagra.1111s0025
I
0.665
Cagra.1138s0003
Capsella grandiflora
Cagra.1138s0003
I
0.841
Cagra.15509s0001
Capsella grandiflora
Cagra.15509s0001
I
0.707
Carubv10007255m.g
Capsella rubella
Carubv10007255m.g
I
0.707
Carubv10014367m.g
Capsella rubella
Carubv10014367m.g
I
0.710
Carubv10018530m.g
Capsella rubella
Carubv10018530m.g
I
0.841
Carubv10021411m.g
Capsella rubella
Carubv10021411m.g
I
0.665
cassava24389.valid.m1
Manihot esculenta
cassava24389.valid.m1
I
0.710
cassava24463.valid.m1
Manihot esculenta
cassava24463.valid.m1
I
0.688
cassava29820.valid.m1
Manihot esculenta
cassava29820.valid.m1
I
0.673
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.688
cassava6348.valid.m1
Manihot esculenta
cassava6348.valid.m1
I
0.678
cassava9274.m1
Manihot esculenta
cassava9274.m1
I
0.678
cassava9891.m1
Manihot esculenta
cassava9891.m1
I
0.790
Ca_07872
Cicer arietinum
Ca_07872
I
0.708
Ca_17627
Cicer arietinum
Ca_17627
I
0.685
Ca_20437
Cicer arietinum
Ca_20437
I
0.705
chr1.CM0163.50.nc
Lotus japonicus
chr1.CM0163.50.nc
I
0.680
Ciclev10006914m.g
Citrus clementina
Ciclev10006914m.g
I
0.710
Ciclev10013466m.g
Citrus clementina
Ciclev10013466m.g
I
0.784
Ciclev10015648m.g
Citrus clementina
Ciclev10015648m.g
I
0.663
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
0.667
Cla007745
Citrullus lanatus
Cla007745
I
0.710
Cla016762
Citrullus lanatus
Cla016762
I
0.757
Cla021798
Citrullus lanatus
Cla021798
I
0.710
Cucsa.238540
Cucumis sativus
Cucsa.238540
I
0.761
Cucsa.255900
Cucumis sativus
Cucsa.255900
I
0.710
Cucsa.383230
Cucumis sativus
Cucsa.383230
I
0.710
Eucgr.A02110
Eucalyptus grandis
Eucgr.A02110
I
0.664
Eucgr.B03606
Eucalyptus grandis
Eucgr.B03606
I
0.678
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
0.671
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.664
Eucgr.H02896
Eucalyptus grandis
Eucgr.H02896
I
0.689
Eucgr.I02057
Eucalyptus grandis
Eucgr.I02057
I
0.797
Eucgr.K01504
Eucalyptus grandis
Eucgr.K01504
I
0.664
evm.TU.supercontig_119.55
Carica papaya
evm.TU.supercontig_119.55
I
0.678
evm.TU.supercontig_14.220
Carica papaya
evm.TU.supercontig_14.220
I
0.748
evm.TU.supercontig_59.23
Carica papaya
evm.TU.supercontig_59.23
I
0.710
F775_06959
Aegilops tauschii
F775_06959
I
0.690
F775_23572
Aegilops tauschii
F775_23572
I
0.664
fgenesh2_kg.3__2645__AT3G24310.1
Arabidopsis lyrata
fgenesh2_kg.3__2645__AT3G24310.1
I
0.710
ATMYB121
Arabidopsis lyrata
fgenesh2_kg.5__710__AT3G30210.1
I
0.835
fgenesh2_kg.9__1__AT4G13480.1
Arabidopsis lyrata
fgenesh2_kg.9__1__AT4G13480.1
I
0.709
gene08694-v1.0-hybrid
Fragaria vesca
gene08694-v1.0-hybrid
I
0.673
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
0.667
gene25098-v1.0-hybrid
Fragaria vesca
gene25098-v1.0-hybrid
I
0.674
gene28293-v1.0-hybrid
Fragaria vesca
gene28293-v1.0-hybrid
I
0.710
GLYMA04G26650
Glycine max
GLYMA04G26650
I
0.699
GLYMA05G35050
Glycine max
GLYMA05G35050
I
0.683
GLYMA06G38340
Glycine max
GLYMA06G38340
I
0.699
GLYMA08G27660
Glycine max
GLYMA08G27660
I
0.666
GLYMA10G26681
Glycine max
GLYMA10G26681
I
0.710
GLYMA10G33450
Glycine max
GLYMA10G33450
I
0.680
GLYMA15G14190
Glycine max
GLYMA15G14190
I
0.682
GLYMA17G17560
Glycine max
GLYMA17G17560
I
0.710
GLYMA18G50881
Glycine max
GLYMA18G50881
I
0.706
GLYMA18G50891
Glycine max
GLYMA18G50891
I
0.728
GLYMA20G20980
Glycine max
GLYMA20G20980
I
0.693
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.670
GLYMA20G34140
Glycine max
GLYMA20G34140
I
0.696
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.681
Gorai.001G090100
Gossypium raimondii
Gorai.001G090100
I
0.756
Gorai.001G207500
Gossypium raimondii
Gorai.001G207500
I
0.810
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.738
Gorai.005G054900
Gossypium raimondii
Gorai.005G054900
I
0.716
Gorai.006G073500
Gossypium raimondii
Gorai.006G073500
I
0.713
Gorai.006G254200
Gossypium raimondii
Gorai.006G254200
I
0.723
Gorai.007G350500
Gossypium raimondii
Gorai.007G350500
I
0.678
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.664
GRMZM2G027697
Zea mays
GRMZM2G027697
I
0.709
GRMZM2G043792
Zea mays
GRMZM2G043792
I
0.679
GRMZM2G054111
Zea mays
GRMZM2G054111
I
0.673
GRMZM2G089686
Zea mays
GRMZM2G089686
I
0.673
GSMUA_Achr11G02410_001
Musa acuminata
GSMUA_Achr11G02410_001
I
0.735
GSMUA_Achr11G17190_001
Musa acuminata
GSMUA_Achr11G17190_001
I
0.671
GSMUA_Achr1G03450_001
Musa acuminata
GSMUA_Achr1G03450_001
I
0.668
GSMUA_Achr8G12710_001
Musa acuminata
GSMUA_Achr8G12710_001
I
0.709
GSMUA_Achr8G29910_001
Musa acuminata
GSMUA_Achr8G29910_001
I
0.702
GSMUA_AchrUn_randomG00010_001
Musa acuminata
GSMUA_AchrUn_randomG00010_001
I
0.663
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.672
LPERR04G14700
Leersia perrieri
LPERR04G14700
I
0.695
Lus10000470.g
Linum usitatissimum
Lus10000470.g
I
0.670
Lus10005079.g
Linum usitatissimum
Lus10005079.g
I
0.751
Lus10014453.g
Linum usitatissimum
Lus10014453.g
I
0.687
Lus10023711.g
Linum usitatissimum
Lus10023711.g
I
0.714
Lus10033438.g
Linum usitatissimum
Lus10033438.g
I
0.670
Lus10034372.g
Linum usitatissimum
Lus10034372.g
I
0.745
MDP0000133412
Malus domestica
MDP0000133412
I
0.707
MDP0000183451
Malus domestica
MDP0000183451
I
0.707
MDP0000286143
Malus domestica
MDP0000286143
I
0.763
MDP0000655330
Malus domestica
MDP0000655330
I
0.678
MDP0000723614
Malus domestica
MDP0000723614
I
0.678
MDP0000791870
Malus domestica
MDP0000791870
I
0.678
MDP0000915330
Malus domestica
MDP0000915330
I
0.667
mgf002201m
Mimulus guttatus
mgf002201m
I
0.764
mgf003913m
Mimulus guttatus
mgf003913m
I
0.663
mgf004640m
Mimulus guttatus
mgf004640m
I
0.719
MLOC_6786
Hordeum vulgare
MLOC_6786
I
0.709
MLOC_9927
Hordeum vulgare
MLOC_9927
I
0.673
MTR_1g045610
Medicago truncatula
MTR_1g045610
I
0.705
MTR_1g073170
Medicago truncatula
MTR_1g073170
I
0.686
OB02G31640
Oryza brachyantha
OB02G31640
I
0.709
OB03G13340
Oryza brachyantha
OB03G13340
I
0.673
OB04G25360
Oryza brachyantha
OB04G25360
I
0.695
OBART02G24300
Oryza barthii
OBART02G24300
I
0.709
OGLUM02G24660
Oryza glumaepatula
OGLUM02G24660
I
0.700
OMERI02G23750
Oryza meridionalis
OMERI02G23750
I
0.709
ONIVA09G12460
Oryza nivara
ONIVA09G12460
I
0.709
OPUNC02G22200
Oryza punctata
OPUNC02G22200
I
0.709
orange1.1g040726m.g
Citrus sinensis
orange1.1g040726m.g
I
0.663
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
0.667
orange1.1g047839m.g
Citrus sinensis
orange1.1g047839m.g
I
0.710
orange1.1g047854m.g
Citrus sinensis
orange1.1g047854m.g
I
0.784
ORGLA02G0210000
Oryza glaberrima
ORGLA02G0210000
I
0.709
ORGLA03G0030900
Oryza glaberrima
ORGLA03G0030900
I
0.673
ORGLA04G0153500
Oryza glaberrima
ORGLA04G0153500
I
0.695
ORUFI02G25650
Oryza rufipogon
ORUFI02G25650
I
0.709
ORUFI03G03040
Oryza rufipogon
ORUFI03G03040
I
0.673
ORUFI04G19690
Oryza rufipogon
ORUFI04G19690
I
0.695
OS02G0618400
Oryza sativa
OS02G0618400
I
0.709
OS03G0142600
Oryza sativa
OS03G0142600
I
0.673
OS04G0508500
Oryza sativa
OS04G0508500
I
0.695
Pavir.Aa01294
Panicum virgatum
Pavir.Aa01294
I
0.709
Pavir.Ga01308
Panicum virgatum
Pavir.Ga01308
I
0.704
Pavir.Ia04415
Panicum virgatum
Pavir.Ia04415
I
0.673
Pavir.Ib00221
Panicum virgatum
Pavir.Ib00221
I
0.669
Pavir.J28445
Panicum virgatum
Pavir.J28445
I
0.670
Pavir.J37992
Panicum virgatum
Pavir.J37992
I
0.709
Pavir.J39490
Panicum virgatum
Pavir.J39490
I
0.670
PGSC0003DMG400001376
Solanum tuberosum
PGSC0003DMG400001376
I
0.789
PGSC0003DMG400001504
Solanum tuberosum
PGSC0003DMG400001504
I
0.705
PGSC0003DMG400027202
Solanum tuberosum
PGSC0003DMG400027202
I
0.715
PK14784.1
Cannabis sativa
PK14784.1
I
0.667
Pm005571
Prunus mume
Pm005571
I
0.685
Pm009050
Prunus mume
Pm009050
I
0.710
Pm015392
Prunus mume
Pm015392
I
0.793
Pm018338
Prunus mume
Pm018338
I
0.667
Pm024189
Prunus mume
Pm024189
I
0.664
Pm027047
Prunus mume
Pm027047
I
0.673
Pm029082
Prunus mume
Pm029082
I
0.672
POPTR_0001s04240
Populus trichocarpa
POPTR_0001s04240
I
0.661
POPTR_0003s21120
Populus trichocarpa
POPTR_0003s21120
I
0.678
POPTR_0004s11460
Populus trichocarpa
POPTR_0004s11460
I
0.798
POPTR_0004s11720
Populus trichocarpa
POPTR_0004s11720
I
0.801
POPTR_0006s29080
Populus trichocarpa
POPTR_0006s29080
I
0.675
POPTR_0008s17350
Populus trichocarpa
POPTR_0008s17350
I
0.669
POPTR_0010s07450
Populus trichocarpa
POPTR_0010s07450
I
0.707
POPTR_0013s05300
Populus trichocarpa
POPTR_0013s05300
I
0.663
POPTR_0017s13370
Populus trichocarpa
POPTR_0017s13370
I
0.801
POPTR_0018s03770
Populus trichocarpa
POPTR_0018s03770
I
0.673
POPTR_0019s05210
Populus trichocarpa
POPTR_0019s05210
I
0.670
PRUPE_ppa006730mg
Prunus persica
PRUPE_ppa006730mg
I
0.678
PRUPE_ppa009143mg
Prunus persica
PRUPE_ppa009143mg
I
0.672
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.667
PRUPE_ppa016385mg
Prunus persica
PRUPE_ppa016385mg
I
0.798
PRUPE_ppa017942mg
Prunus persica
PRUPE_ppa017942mg
I
0.707
PRUPE_ppa018430mg
Prunus persica
PRUPE_ppa018430mg
I
0.664
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.696
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
0.673
PRUPE_ppa024234mg
Prunus persica
PRUPE_ppa024234mg
I
0.713
SapurV1A.0081s0400
Salix purpurea
SapurV1A.0081s0400
I
0.678
SapurV1A.0096s0360
Salix purpurea
SapurV1A.0096s0360
I
0.710
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
0.675
SapurV1A.0323s0160
Salix purpurea
SapurV1A.0323s0160
I
0.775
SapurV1A.0553s0100
Salix purpurea
SapurV1A.0553s0100
I
0.677
SapurV1A.0553s0110
Salix purpurea
SapurV1A.0553s0110
I
0.677
SapurV1A.0598s0010
Salix purpurea
SapurV1A.0598s0010
I
0.665
SapurV1A.0918s0130
Salix purpurea
SapurV1A.0918s0130
I
0.661
SapurV1A.1276s0050
Salix purpurea
SapurV1A.1276s0050
I
0.663
Sb01g047450
Sorghum bicolor
Sb01g047450
I
0.673
Sb04g026210
Sorghum bicolor
Sb04g026210
I
0.709
Si010822m.g
Setaria italica
Si010822m.g
I
0.704
Si018007m.g
Setaria italica
Si018007m.g
I
0.709
Si035722m.g
Setaria italica
Si035722m.g
I
0.670
Si037281m.g
Setaria italica
Si037281m.g
I
0.673
Solyc01g005660.1
Solanum lycopersicum
Solyc01g005660.1
I
0.673
Solyc02g089190.1
Solanum lycopersicum
Solyc02g089190.1
I
0.789
Solyc05g053150.1
Solanum lycopersicum
Solyc05g053150.1
I
0.719
Solyc09g090790.2
Solanum lycopersicum
Solyc09g090790.2
I
0.705
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.688
TCM_000535
Theobroma cacao
TCM_000535
I
0.663
TCM_018971
Theobroma cacao
TCM_018971
I
0.789
TCM_021037
Theobroma cacao
TCM_021037
I
0.710
TCM_024180
Theobroma cacao
TCM_024180
I
0.678
TCM_025910
Theobroma cacao
TCM_025910
I
0.663
TCM_037377
Theobroma cacao
TCM_037377
I
0.678
Thhalv10002634m.g
Eutrema salsugineum
Thhalv10002634m.g
I
0.710
Thhalv10005370m.g
Eutrema salsugineum
Thhalv10005370m.g
I
0.803
Traes_2AL_605C25CDF
Triticum aestivum
Traes_2AL_605C25CDF
I
0.690
Traes_6AL_89BA7115C
Triticum aestivum
Traes_6AL_89BA7115C
I
0.664
Traes_6BL_8E4A831B6
Triticum aestivum
Traes_6BL_8E4A831B6
I
0.709
Traes_6DL_FDFCBA57D
Triticum aestivum
Traes_6DL_FDFCBA57D
I
0.664
Traes_6DL_FDFCBA57D1
Triticum aestivum
Traes_6DL_FDFCBA57D1
I
0.664
TRIUR3_18020
Triticum urartu
TRIUR3_18020
I
0.690
TRIUR3_31527
Triticum urartu
TRIUR3_31527
I
0.664
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.684
VIT_05s0049g02260
Vitis vinifera
VIT_05s0049g02260
I
0.713
VIT_08s0007g07230
Vitis vinifera
VIT_08s0007g07230
I
0.689
VIT_11s0016g05660
Vitis vinifera
VIT_11s0016g05660
N
0.661
VIT_11s0016g05690
Vitis vinifera
VIT_11s0016g05690
N
0.666
ATMYB121
Vitis vinifera
VIT_14s0083g01060
I
0.803
VIT_17s0000g03560
Vitis vinifera
VIT_17s0000g03560
I
0.667