CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra023972
(
Brassica rapa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bra023972
T267961_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR10
M02702_2.00
Arabidopsis thaliana
AGATHYKN
NMRDATCT
SELEX
Mathelier et al.(2014)
MA0121.1
0.771
0.936
ARR10
M11045_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ARR10_01
0.771
0.936
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra023972.1-P
Myb
194
244
RVLWTRELHNKFLAAVDHLGVEKAQPKKILELMNVDKLTRENVASHLQKFR
Links
Other
Myb/SANT
family TFs
Other
Brassica rapa
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g115520
Brassica oleracea
Bo7g115520
I
0.901
Thhalv10024866m.g
Eutrema salsugineum
Thhalv10024866m.g
I
0.805
ARR10
Arabidopsis lyrata
Al_scaffold_0007_907
I
0.771
ARR10
Arabidopsis thaliana
AT4G31920
D
0.771
Bostr.7867s1047
Boechera stricta
Bostr.7867s1047
I
0.771
Cagra.3807s0064
Capsella grandiflora
Cagra.3807s0064
I
0.740
Carubv10004554m.g
Capsella rubella
Carubv10004554m.g
I
0.740
Ca_09080
Cicer arietinum
Ca_09080
I
0.693
Lus10005340.g
Linum usitatissimum
Lus10005340.g
I
0.693
Lus10041020.g
Linum usitatissimum
Lus10041020.g
I
0.693