Bra034751 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra034751 T268094_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK21687.1
M01282_2.00
Cannabis sativa
HWAAACCYH

DRGGTTTWD
PBM
Lambert et al.(2019)
pTH11299
0.849 0.979
TRP5
M01266_2.00
Arabidopsis thaliana
NHWAAACCYH

DRGGTTTWDN
PBM
Lambert et al.(2019)
pTH9963
0.849 0.957
TRP2
M07092_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCC

GGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_col_a
0.841 0.957
TRP2
M07093_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT

AGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP2_colamp_a
0.841 0.957
TRP1
M07148_2.00
Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA

TTAGGGTTTAGGGTTTAGGGTTT
Dap-seq
OMalley et al.(2016)
TRP1_col
0.831 0.936
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra034751.1-P Myb 497 547

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALUE_0000326401 Ascaris lumbricoides ALUE_0000326401 I
ASIM_0001335601 Anisakis simplex ASIM_0001335601 I
ASU_05094 Ascaris suum ASU_05094 I
BGLB003270 Biomphalaria glabrata BGLB003270 I
BGLB009720 Biomphalaria glabrata BGLB009720 I
CapteG178189 Capitella teleta CapteG178189 N
CapteG223236 Capitella teleta CapteG223236 N
CGI_10015382 Crassostrea gigas CGI_10015382 N
CGI_10024700 Crassostrea gigas CGI_10024700 N
CLEC000050 Cimex lectularius CLEC000050 N
CLEC001633 Cimex lectularius CLEC001633 N
D917_09309 Trichinella nativa D917_09309 N
D918_04648 Trichuris suis D918_04648 N
DAPPUDRAFT_223098 Daphnia pulex DAPPUDRAFT_223098 N
DME_0000215901 Dracunculus medinensis DME_0000215901 I
EFV48635 Trichinella spiralis EFV48635 N
EFV59523 Trichinella spiralis EFV59523 N
EFV60132 Trichinella spiralis EFV60132 N
GB46398 Apis mellifera GB46398 N
HHAL003348-PA Halyomorpha halys HHAL003348-PA N
ISCW006531 Ixodes scapularis ISCW006531 I
PEQ_0001019701 Parascaris equorum PEQ_0001019701 I
RPRC001027 Rhodnius prolixus RPRC001027 N
Sakowv30032301m.g Saccoglossus kowalevskii Sakowv30032301m.g N
SBAD_0000414301 Soboliphyme baturini SBAD_0000414301 N
SBAD_0000555201 Soboliphyme baturini SBAD_0000555201 N
SMAR014806 Strigamia maritima SMAR014806 I
SPU_014528 Strongylocentrotus purpuratus SPU_014528 N
SPU_021150 Strongylocentrotus purpuratus SPU_021150 I
TMUE_s0069005700 Trichuris muris TMUE_s0069005700 N
TTRE_0000080801 Trichuris trichiura TTRE_0000080801 N
TTRE_0000080901 Trichuris trichiura TTRE_0000080901 N