Bra039364 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra039364 T268145_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.850 0.915
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.850 0.915
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.806 0.851
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.726 0.830
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN

NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.726 0.830
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.679 0.787
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN

NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.663 0.723
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT

ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.663 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra039364.1-P Myb 230 281

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

372 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R001177 Calypte anna Aan_R001177 I
Aan_R007355 Calypte anna Aan_R007355 I
Afo_R004850 Aptenodytes forsteri Afo_R004850 I
Afo_R005014 Aptenodytes forsteri Afo_R005014 I
Alligator_sinensis_CCG011357.1 Alligator sinensis Alligator_sinensis_CCG011357.1 I
Alligator_sinensis_CCG011722.1 Alligator sinensis Alligator_sinensis_CCG011722.1 I
Brh_R002617 Buceros rhinoceros Brh_R002617 I
Brh_R008770 Buceros rhinoceros Brh_R008770 I
Cmyd_10011594 Chelonia mydas Cmyd_10011594 I
Cmyd_10020811 Chelonia mydas Cmyd_10020811 I
BACH1 Anolis carolinensis ENSACAG00000001974 I
BACH2 Anolis carolinensis ENSACAG00000014366 I
ENSAMEG00000003595 Ailuropoda melanoleuca ENSAMEG00000003595 I
ENSAMEG00000008438 Ailuropoda melanoleuca ENSAMEG00000008438 I
ENSAMXG00000008686 Astyanax mexicanus ENSAMXG00000008686 I
ENSAMXG00000014356 Astyanax mexicanus ENSAMXG00000014356 I
ENSAMXG00000020851 Astyanax mexicanus ENSAMXG00000020851 I
ENSAPLG00000002486 Anas platyrhynchos ENSAPLG00000002486 I
ENSAPLG00000004662 Anas platyrhynchos ENSAPLG00000004662 I
BACH1 Bos taurus ENSBTAG00000004139 I
BACH2 Bos taurus ENSBTAG00000020713 I
ENSBTAP00000005416-D1 Bos grunniens ENSBTAP00000005416-D1 I
ENSBTAP00000027603-D1 Bos grunniens ENSBTAP00000027603-D1 I
BACH2 Canis familiaris ENSCAFG00000003116 I
BACH1 Canis familiaris ENSCAFG00000008729 I
BACH1 Choloepus hoffmanni ENSCHOG00000008331 I
BACH2 Callithrix jacchus ENSCJAG00000001013 I
BACH1 Callithrix jacchus ENSCJAG00000008651 I
ENSCPOG00000009261 Cavia porcellus ENSCPOG00000009261 I
ENSCSAG00000009211 Chlorocebus sabaeus ENSCSAG00000009211 I
ENSCSAG00000017273 Chlorocebus sabaeus ENSCSAG00000017273 I
bach1b Danio rerio ENSDARG00000002196 I
bach2b Danio rerio ENSDARG00000004074 I
bach2a Danio rerio ENSDARG00000036569 I
BACH1 Dasypus novemcinctus ENSDNOG00000034053 I
BACH2 Dasypus novemcinctus ENSDNOG00000042939 I
ENSDORG00000003106 Dipodomys ordii ENSDORG00000003106 I
BACH1 Equus caballus ENSECAG00000000307 I
BACH2 Equus caballus ENSECAG00000010522 I
BACH2 Erinaceus europaeus ENSEEUG00000001063 I
BACH1 Erinaceus europaeus ENSEEUG00000011474 I
BACH1 Echinops telfairi ENSETEG00000017222 I
ENSFALG00000003160 Ficedula albicollis ENSFALG00000003160 I
ENSFALG00000006318 Ficedula albicollis ENSFALG00000006318 I
BACH2 Felis catus ENSFCAG00000008901 I
BACH1 Felis catus ENSFCAG00000010547 I
BACH2 Homo sapiens ENSG00000112182 D
BACH1 Homo sapiens ENSG00000156273 D
bach2a Gasterosteus aculeatus ENSGACG00000002017 I
bach2b Gasterosteus aculeatus ENSGACG00000006245 I
BACH2 Gallus gallus ENSGALG00000015605 I
BACH1 Gallus gallus ENSGALG00000015828 I
BACH1 Gorilla gorilla ENSGGOG00000006094 I
BACH2 Gorilla gorilla ENSGGOG00000012497 I
ENSGMOG00000002053 Gadus morhua ENSGMOG00000002053 I
ENSGMOG00000009808 Gadus morhua ENSGMOG00000009808 I
ENSLACG00000001994 Latimeria chalumnae ENSLACG00000001994 I
ENSLACG00000003435 Latimeria chalumnae ENSLACG00000003435 I
BACH1 Loxodonta africana ENSLAFG00000029492 I
ENSLOCG00000009077 Lepisosteus oculatus ENSLOCG00000009077 I
ENSLOCG00000016952 Lepisosteus oculatus ENSLOCG00000016952 I
ENSMEUG00000016322 Macropus eugenii ENSMEUG00000016322 I
BACH2 Meleagris gallopavo ENSMGAG00000013626 I
BACH1 Meleagris gallopavo ENSMGAG00000014508 I
ENSMICG00000005097 Microcebus murinus ENSMICG00000005097 I
BACH2 Myotis lucifugus ENSMLUG00000001651 I
BACH1 Myotis lucifugus ENSMLUG00000010419 I
BACH2 Macaca mulatta ENSMMUG00000009736 I
BACH1 Macaca mulatta ENSMMUG00000011095 I
BACH2 Monodelphis domestica ENSMODG00000018176 I
BACH1 Monodelphis domestica ENSMODG00000020976 I
ENSMPUG00000001053 Mustela putorius furo ENSMPUG00000001053 I
ENSMPUG00000009102 Mustela putorius furo ENSMPUG00000009102 I
Bach1 Mus musculus ENSMUSG00000025612 D
Bach2 Mus musculus ENSMUSG00000040270 D
ENSNLEG00000003356 Nomascus leucogenys ENSNLEG00000003356 I
ENSNLEG00000013316 Nomascus leucogenys ENSNLEG00000013316 I
BACH1 Ornithorhynchus anatinus ENSOANG00000005242 I
ENSOARG00000012361 Ovis aries ENSOARG00000012361 I
ENSOARG00000014393 Ovis aries ENSOARG00000014393 I
BACH2 Oryctolagus cuniculus ENSOCUG00000004231 I
BACH1 Oryctolagus cuniculus ENSOCUG00000016716 I
BACH1 Otolemur garnettii ENSOGAG00000012819 I
BACH2 Otolemur garnettii ENSOGAG00000024390 I
ENSONIG00000001606 Oreochromis niloticus ENSONIG00000001606 I
ENSONIG00000004708 Oreochromis niloticus ENSONIG00000004708 I
BACH1 Ochotona princeps ENSOPRG00000003937 I
ENSORLG00000004475 Oryzias latipes ENSORLG00000004475 I
bach2a Oryzias latipes ENSORLG00000011098 I
bach2b Oryzias latipes ENSORLG00000017926 I
ENSP00000286800 Macaca fascicularis ENSP00000286800 I
ENSP00000345642 Macaca fascicularis ENSP00000345642 I
ENSPANG00000006817 Papio anubis ENSPANG00000006817 I
ENSPANG00000007661 Papio anubis ENSPANG00000007661 I
BACH2 Procavia capensis ENSPCAG00000001355 I
ENSPFOG00000009427 Poecilia formosa ENSPFOG00000009427 I
ENSPFOG00000013310 Poecilia formosa ENSPFOG00000013310 I
ENSPFOG00000017325 Poecilia formosa ENSPFOG00000017325 I
ENSPMAG00000005517 Petromyzon marinus ENSPMAG00000005517 I
ENSPPYG00000011322 Pongo abelii ENSPPYG00000011322 I
ENSPPYG00000016849 Pongo abelii ENSPPYG00000016849 I
ENSPSIG00000009237 Pelodiscus sinensis ENSPSIG00000009237 I
ENSPSIG00000016485 Pelodiscus sinensis ENSPSIG00000016485 I
BACH1 Pan troglodytes ENSPTRG00000013824 I
BACH2 Pan troglodytes ENSPTRG00000018426 I
BACH1 Pteropus vampyrus ENSPVAG00000003585 I
BACH2 Pteropus vampyrus ENSPVAG00000016152 I
Bach1 Rattus norvegicus ENSRNOG00000001582 I
Bach2 Rattus norvegicus ENSRNOG00000006170 I
BACH1 Sorex araneus ENSSARG00000010869 I
ENSSHAG00000006419 Sarcophilus harrisii ENSSHAG00000006419 I
ENSSHAG00000016295 Sarcophilus harrisii ENSSHAG00000016295 I
BACH2 Sus scrofa ENSSSCG00000004332 I
BACH1 Sus scrofa ENSSSCG00000012029 I
ENSSTOG00000003942 Ictidomys tridecemlineatus ENSSTOG00000003942 I
ENSSTOG00000005129 Ictidomys tridecemlineatus ENSSTOG00000005129 I
BACH2 Tupaia belangeri ENSTBEG00000008433 I
BACH2 Taeniopygia guttata ENSTGUG00000012380 I
BACH1 Taeniopygia guttata ENSTGUG00000013585 I
ENSTNIG00000001421 Tetraodon nigroviridis ENSTNIG00000001421 I
bach2b Tetraodon nigroviridis ENSTNIG00000003864 I
ENSTRUG00000009007 Takifugu rubripes ENSTRUG00000009007 I
ENSTSYG00000009578 Tarsius syrichta ENSTSYG00000009578 I
ENSTSYG00000010694 Tarsius syrichta ENSTSYG00000010694 I
BACH2 Tursiops truncatus ENSTTRG00000003941 I
BACH1 Vicugna pacos ENSVPAG00000012419 I
ENSXMAG00000013761 Xiphophorus maculatus ENSXMAG00000013761 I
ENSXMAG00000014429 Xiphophorus maculatus ENSXMAG00000014429 I
ENSXMAG00000017662 Xiphophorus maculatus ENSXMAG00000017662 I
Gfo_R007851 Geospiza fortis Gfo_R007851 I
Gfo_R008348 Geospiza fortis Gfo_R008348 I
Myotis_brandtii_BACH1_10005484 Myotis brandtii Myotis_brandtii_BACH1_10005484 I
Myotis_brandtii_Bach2_10023882 Myotis brandtii Myotis_brandtii_Bach2_10023882 I
Ogr00706 Ophisaurus gracilis Ogr00706 I
Ogr07752 Ophisaurus gracilis Ogr07752 I
Pvit_09321 Pogona vitticeps Pvit_09321 I
Pvit_10701 Pogona vitticeps Pvit_10701 I
Tal_R000432 Tyto alba Tal_R000432 I
bach1 Xenopus tropicalis XB-GENE-957116 I
bach2 Xenopus tropicalis XB-GENE-994313 I