CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra039364
(
Brassica rapa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Bra039364
T268145_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.850
0.915
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.850
0.915
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.806
0.851
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.726
0.830
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.726
0.830
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.679
0.787
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN
NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.663
0.723
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT
ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.663
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra039364.1-P
Myb
230
281
RMRWTPELHESFLKSVNKLEGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Brassica rapa
TFs
372 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R001177
Calypte anna
Aan_R001177
I
Aan_R007355
Calypte anna
Aan_R007355
I
Afo_R004850
Aptenodytes forsteri
Afo_R004850
I
Afo_R005014
Aptenodytes forsteri
Afo_R005014
I
Alligator_sinensis_CCG011357.1
Alligator sinensis
Alligator_sinensis_CCG011357.1
I
Alligator_sinensis_CCG011722.1
Alligator sinensis
Alligator_sinensis_CCG011722.1
I
Brh_R002617
Buceros rhinoceros
Brh_R002617
I
Brh_R008770
Buceros rhinoceros
Brh_R008770
I
Cmyd_10011594
Chelonia mydas
Cmyd_10011594
I
Cmyd_10020811
Chelonia mydas
Cmyd_10020811
I
BACH1
Anolis carolinensis
ENSACAG00000001974
I
BACH2
Anolis carolinensis
ENSACAG00000014366
I
ENSAMEG00000003595
Ailuropoda melanoleuca
ENSAMEG00000003595
I
ENSAMEG00000008438
Ailuropoda melanoleuca
ENSAMEG00000008438
I
ENSAMXG00000008686
Astyanax mexicanus
ENSAMXG00000008686
I
ENSAMXG00000014356
Astyanax mexicanus
ENSAMXG00000014356
I
ENSAMXG00000020851
Astyanax mexicanus
ENSAMXG00000020851
I
ENSAPLG00000002486
Anas platyrhynchos
ENSAPLG00000002486
I
ENSAPLG00000004662
Anas platyrhynchos
ENSAPLG00000004662
I
BACH1
Bos taurus
ENSBTAG00000004139
I
BACH2
Bos taurus
ENSBTAG00000020713
I
ENSBTAP00000005416-D1
Bos grunniens
ENSBTAP00000005416-D1
I
ENSBTAP00000027603-D1
Bos grunniens
ENSBTAP00000027603-D1
I
BACH2
Canis familiaris
ENSCAFG00000003116
I
BACH1
Canis familiaris
ENSCAFG00000008729
I
BACH1
Choloepus hoffmanni
ENSCHOG00000008331
I
BACH2
Callithrix jacchus
ENSCJAG00000001013
I
BACH1
Callithrix jacchus
ENSCJAG00000008651
I
ENSCPOG00000009261
Cavia porcellus
ENSCPOG00000009261
I
ENSCSAG00000009211
Chlorocebus sabaeus
ENSCSAG00000009211
I
ENSCSAG00000017273
Chlorocebus sabaeus
ENSCSAG00000017273
I
bach1b
Danio rerio
ENSDARG00000002196
I
bach2b
Danio rerio
ENSDARG00000004074
I
bach2a
Danio rerio
ENSDARG00000036569
I
BACH1
Dasypus novemcinctus
ENSDNOG00000034053
I
BACH2
Dasypus novemcinctus
ENSDNOG00000042939
I
ENSDORG00000003106
Dipodomys ordii
ENSDORG00000003106
I
BACH1
Equus caballus
ENSECAG00000000307
I
BACH2
Equus caballus
ENSECAG00000010522
I
BACH2
Erinaceus europaeus
ENSEEUG00000001063
I
BACH1
Erinaceus europaeus
ENSEEUG00000011474
I
BACH1
Echinops telfairi
ENSETEG00000017222
I
ENSFALG00000003160
Ficedula albicollis
ENSFALG00000003160
I
ENSFALG00000006318
Ficedula albicollis
ENSFALG00000006318
I
BACH2
Felis catus
ENSFCAG00000008901
I
BACH1
Felis catus
ENSFCAG00000010547
I
BACH2
Homo sapiens
ENSG00000112182
D
BACH1
Homo sapiens
ENSG00000156273
D
bach2a
Gasterosteus aculeatus
ENSGACG00000002017
I
bach2b
Gasterosteus aculeatus
ENSGACG00000006245
I
BACH2
Gallus gallus
ENSGALG00000015605
I
BACH1
Gallus gallus
ENSGALG00000015828
I
BACH1
Gorilla gorilla
ENSGGOG00000006094
I
BACH2
Gorilla gorilla
ENSGGOG00000012497
I
ENSGMOG00000002053
Gadus morhua
ENSGMOG00000002053
I
ENSGMOG00000009808
Gadus morhua
ENSGMOG00000009808
I
ENSLACG00000001994
Latimeria chalumnae
ENSLACG00000001994
I
ENSLACG00000003435
Latimeria chalumnae
ENSLACG00000003435
I
BACH1
Loxodonta africana
ENSLAFG00000029492
I
ENSLOCG00000009077
Lepisosteus oculatus
ENSLOCG00000009077
I
ENSLOCG00000016952
Lepisosteus oculatus
ENSLOCG00000016952
I
ENSMEUG00000016322
Macropus eugenii
ENSMEUG00000016322
I
BACH2
Meleagris gallopavo
ENSMGAG00000013626
I
BACH1
Meleagris gallopavo
ENSMGAG00000014508
I
ENSMICG00000005097
Microcebus murinus
ENSMICG00000005097
I
BACH2
Myotis lucifugus
ENSMLUG00000001651
I
BACH1
Myotis lucifugus
ENSMLUG00000010419
I
BACH2
Macaca mulatta
ENSMMUG00000009736
I
BACH1
Macaca mulatta
ENSMMUG00000011095
I
BACH2
Monodelphis domestica
ENSMODG00000018176
I
BACH1
Monodelphis domestica
ENSMODG00000020976
I
ENSMPUG00000001053
Mustela putorius furo
ENSMPUG00000001053
I
ENSMPUG00000009102
Mustela putorius furo
ENSMPUG00000009102
I
Bach1
Mus musculus
ENSMUSG00000025612
D
Bach2
Mus musculus
ENSMUSG00000040270
D
ENSNLEG00000003356
Nomascus leucogenys
ENSNLEG00000003356
I
ENSNLEG00000013316
Nomascus leucogenys
ENSNLEG00000013316
I
BACH1
Ornithorhynchus anatinus
ENSOANG00000005242
I
ENSOARG00000012361
Ovis aries
ENSOARG00000012361
I
ENSOARG00000014393
Ovis aries
ENSOARG00000014393
I
BACH2
Oryctolagus cuniculus
ENSOCUG00000004231
I
BACH1
Oryctolagus cuniculus
ENSOCUG00000016716
I
BACH1
Otolemur garnettii
ENSOGAG00000012819
I
BACH2
Otolemur garnettii
ENSOGAG00000024390
I
ENSONIG00000001606
Oreochromis niloticus
ENSONIG00000001606
I
ENSONIG00000004708
Oreochromis niloticus
ENSONIG00000004708
I
BACH1
Ochotona princeps
ENSOPRG00000003937
I
ENSORLG00000004475
Oryzias latipes
ENSORLG00000004475
I
bach2a
Oryzias latipes
ENSORLG00000011098
I
bach2b
Oryzias latipes
ENSORLG00000017926
I
ENSP00000286800
Macaca fascicularis
ENSP00000286800
I
ENSP00000345642
Macaca fascicularis
ENSP00000345642
I
ENSPANG00000006817
Papio anubis
ENSPANG00000006817
I
ENSPANG00000007661
Papio anubis
ENSPANG00000007661
I
BACH2
Procavia capensis
ENSPCAG00000001355
I
ENSPFOG00000009427
Poecilia formosa
ENSPFOG00000009427
I
ENSPFOG00000013310
Poecilia formosa
ENSPFOG00000013310
I
ENSPFOG00000017325
Poecilia formosa
ENSPFOG00000017325
I
ENSPMAG00000005517
Petromyzon marinus
ENSPMAG00000005517
I
ENSPPYG00000011322
Pongo abelii
ENSPPYG00000011322
I
ENSPPYG00000016849
Pongo abelii
ENSPPYG00000016849
I
ENSPSIG00000009237
Pelodiscus sinensis
ENSPSIG00000009237
I
ENSPSIG00000016485
Pelodiscus sinensis
ENSPSIG00000016485
I
BACH1
Pan troglodytes
ENSPTRG00000013824
I
BACH2
Pan troglodytes
ENSPTRG00000018426
I
BACH1
Pteropus vampyrus
ENSPVAG00000003585
I
BACH2
Pteropus vampyrus
ENSPVAG00000016152
I
Bach1
Rattus norvegicus
ENSRNOG00000001582
I
Bach2
Rattus norvegicus
ENSRNOG00000006170
I
BACH1
Sorex araneus
ENSSARG00000010869
I
ENSSHAG00000006419
Sarcophilus harrisii
ENSSHAG00000006419
I
ENSSHAG00000016295
Sarcophilus harrisii
ENSSHAG00000016295
I
BACH2
Sus scrofa
ENSSSCG00000004332
I
BACH1
Sus scrofa
ENSSSCG00000012029
I
ENSSTOG00000003942
Ictidomys tridecemlineatus
ENSSTOG00000003942
I
ENSSTOG00000005129
Ictidomys tridecemlineatus
ENSSTOG00000005129
I
BACH2
Tupaia belangeri
ENSTBEG00000008433
I
BACH2
Taeniopygia guttata
ENSTGUG00000012380
I
BACH1
Taeniopygia guttata
ENSTGUG00000013585
I
ENSTNIG00000001421
Tetraodon nigroviridis
ENSTNIG00000001421
I
bach2b
Tetraodon nigroviridis
ENSTNIG00000003864
I
ENSTRUG00000009007
Takifugu rubripes
ENSTRUG00000009007
I
ENSTSYG00000009578
Tarsius syrichta
ENSTSYG00000009578
I
ENSTSYG00000010694
Tarsius syrichta
ENSTSYG00000010694
I
BACH2
Tursiops truncatus
ENSTTRG00000003941
I
BACH1
Vicugna pacos
ENSVPAG00000012419
I
ENSXMAG00000013761
Xiphophorus maculatus
ENSXMAG00000013761
I
ENSXMAG00000014429
Xiphophorus maculatus
ENSXMAG00000014429
I
ENSXMAG00000017662
Xiphophorus maculatus
ENSXMAG00000017662
I
Gfo_R007851
Geospiza fortis
Gfo_R007851
I
Gfo_R008348
Geospiza fortis
Gfo_R008348
I
Myotis_brandtii_BACH1_10005484
Myotis brandtii
Myotis_brandtii_BACH1_10005484
I
Myotis_brandtii_Bach2_10023882
Myotis brandtii
Myotis_brandtii_Bach2_10023882
I
Ogr00706
Ophisaurus gracilis
Ogr00706
I
Ogr07752
Ophisaurus gracilis
Ogr07752
I
Pvit_09321
Pogona vitticeps
Pvit_09321
I
Pvit_10701
Pogona vitticeps
Pvit_10701
I
Tal_R000432
Tyto alba
Tal_R000432
I
bach1
Xenopus tropicalis
XB-GENE-957116
I
bach2
Xenopus tropicalis
XB-GENE-994313
I