CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CHLREDRAFT_130971
(
Chlamydomonas reinhardtii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
CHLREDRAFT_130971
T268693_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.667
0.660
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.667
0.660
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDP00803
Myb
18
68
RLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Chlamydomonas reinhardtii
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARR14
Arabidopsis thaliana
AT2G01760
D
0.667
BGIOSGA004786
Oryza indica
BGIOSGA004786
I
0.724
RR23
Oryza indica
BGIOSGA005436
I
0.672
RR22
Oryza indica
BGIOSGA022430
I
0.672
Bo2g028820
Brassica oleracea
Bo2g028820
I
0.665
Bra020390
Brassica rapa
Bra020390
I
0.665
BRADI1G47400
Brachypodium distachyon
BRADI1G47400
I
0.672
BRADI2G54787
Brachypodium distachyon
BRADI2G54787
I
0.708
BRADI3G54120
Brachypodium distachyon
BRADI3G54120
I
0.672
F775_08927
Aegilops tauschii
F775_08927
I
0.703
F775_14758
Aegilops tauschii
F775_14758
I
0.672
F775_19079
Aegilops tauschii
F775_19079
I
0.672
GLYMA04G06650
Glycine max
GLYMA04G06650
I
0.672
GLYMA05G34516
Glycine max
GLYMA05G34516
I
0.728
GLYMA06G06730
Glycine max
GLYMA06G06730
I
0.672
GLYMA09G14650
Glycine max
GLYMA09G14650
I
0.683
GLYMA14G13320
Glycine max
GLYMA14G13320
I
0.672
GLYMA15G24770
Glycine max
GLYMA15G24770
I
0.683
GLYMA17G33230
Glycine max
GLYMA17G33230
I
0.672
GRMZM2G409974
Zea mays
GRMZM2G409974
I
0.672
GRMZM2G479110
Zea mays
GRMZM2G479110
I
0.672
LPERR01G31830
Leersia perrieri
LPERR01G31830
I
0.724
LPERR06G04900
Leersia perrieri
LPERR06G04900
I
0.672
MLOC_11341
Hordeum vulgare
MLOC_11341
I
0.672
MLOC_24962
Hordeum vulgare
MLOC_24962
I
0.703
MLOC_61880
Hordeum vulgare
MLOC_61880
I
0.672
MLOC_76165
Hordeum vulgare
MLOC_76165
I
0.672
OB02G42700
Oryza brachyantha
OB02G42700
I
0.672
OB06G14930
Oryza brachyantha
OB06G14930
I
0.672
OBART01G37040
Oryza barthii
OBART01G37040
I
0.724
OBART06G05360
Oryza barthii
OBART06G05360
I
0.672
OGLUM01G41000
Oryza glumaepatula
OGLUM01G41000
I
0.724
OGLUM06G05540
Oryza glumaepatula
OGLUM06G05540
I
0.672
OLONG_001321
Oryza longistaminata
OLONG_001321
I
0.703
OMERI01G34110
Oryza meridionalis
OMERI01G34110
I
0.724
OMERI06G06380
Oryza meridionalis
OMERI06G06380
I
0.672
ONIVA01G41940
Oryza nivara
ONIVA01G41940
I
0.724
ONIVA06G06160
Oryza nivara
ONIVA06G06160
I
0.672
OPUNC01G35910
Oryza punctata
OPUNC01G35910
I
0.724
OPUNC06G05150
Oryza punctata
OPUNC06G05150
I
0.672
ORGLA01G0309000
Oryza glaberrima
ORGLA01G0309000
I
0.724
ORGLA02G0311700
Oryza glaberrima
ORGLA02G0311700
I
0.672
ORGLA06G0048800
Oryza glaberrima
ORGLA06G0048800
I
0.672
ORUFI01G40390
Oryza rufipogon
ORUFI01G40390
I
0.724
ORUFI06G05490
Oryza rufipogon
ORUFI06G05490
I
0.672
OS01G0844900
Oryza sativa
OS01G0844900
I
0.724
RR23
Oryza sativa
OS02G0796500
I
0.672
RR22
Oryza sativa
OS06G0183100
I
0.672
OSTLU_26838
Ostreococcus lucimarinus
OSTLU_26838
I
0.705
PGSC0003DMG400003196
Solanum tuberosum
PGSC0003DMG400003196
I
0.668
PRUPE_ppa024819mg
Prunus persica
PRUPE_ppa024819mg
I
0.672
Sb04g035980
Sorghum bicolor
Sb04g035980
I
0.672
Sb10g005580
Sorghum bicolor
Sb10g005580
I
0.672
ARR14
Arabidopsis lyrata
scaffold_500093.1
I
0.667
Si006013m.g
Setaria italica
Si006013m.g
I
0.672
Si016546m.g
Setaria italica
Si016546m.g
I
0.672
Solyc07g005140.2
Solanum lycopersicum
Solyc07g005140.2
I
0.668
TCM_036926
Theobroma cacao
TCM_036926
I
0.672
TCM_037098
Theobroma cacao
TCM_037098
I
0.683
Traes_6BL_790C095EE
Triticum aestivum
Traes_6BL_790C095EE
I
0.672
Traes_6DL_D1C9CE275
Triticum aestivum
Traes_6DL_D1C9CE275
I
0.672
Traes_7AS_DECB8080D
Triticum aestivum
Traes_7AS_DECB8080D
I
0.672
Traes_7DS_22DE624A5
Triticum aestivum
Traes_7DS_22DE624A5
I
0.672
Traes_7DS_327FBC2CA
Triticum aestivum
Traes_7DS_327FBC2CA
I
0.672
TRIUR3_26858
Triticum urartu
TRIUR3_26858
I
0.672
TRIUR3_28229
Triticum urartu
TRIUR3_28229
I
0.672
VIT_04s0008g05900
Vitis vinifera
VIT_04s0008g05900
I
0.672
VIT_11s0206g00060
Vitis vinifera
VIT_11s0206g00060
I
0.668
Ca_09080
Cicer arietinum
Ca_09080
I
0.672
Cla021325
Citrullus lanatus
Cla021325
I
0.672
Pm005710
Prunus mume
Pm005710
I
0.672
29737.m001227
Ricinus communis
29737.m001227
I
0.683
29848.m004559
Ricinus communis
29848.m004559
I
0.672
cassava18404.valid.m1
Manihot esculenta
cassava18404.valid.m1
I
0.672
cassava18405.valid.m1
Manihot esculenta
cassava18405.valid.m1
I
0.672
cassava262.valid.m1
Manihot esculenta
cassava262.valid.m1
I
0.683
cassava37074.valid.m1
Manihot esculenta
cassava37074.valid.m1
I
0.683
cassava37075.valid.m1
Manihot esculenta
cassava37075.valid.m1
I
0.683
cassava8114.valid.m1
Manihot esculenta
cassava8114.valid.m1
I
0.672
Cucsa.271670
Cucumis sativus
Cucsa.271670
I
0.672
gw1.12.455.1
Ostreococcus RCC809
gw1.12.455.1
I
0.705
mgf001591m
Mimulus guttatus
mgf001591m
I
0.668
mgf014863m
Mimulus guttatus
mgf014863m
I
0.668
Aquca_016_00168
Aquilegia coerulea
Aquca_016_00168
I
0.672
Bostr.26833s0442
Boechera stricta
Bostr.26833s0442
I
0.665
Cagra.0891s0003
Capsella grandiflora
Cagra.0891s0003
I
0.665
Carubv10026052m.g
Capsella rubella
Carubv10026052m.g
I
0.665
Ciclev10007639m.g
Citrus clementina
Ciclev10007639m.g
I
0.672
Ciclev10007648m.g
Citrus clementina
Ciclev10007648m.g
I
0.710
Eucgr.C00380
Eucalyptus grandis
Eucgr.C00380
I
0.668
evm.TU.supercontig_46.117
Carica papaya
evm.TU.supercontig_46.117
I
0.668
gene15029-v1.0-hybrid
Fragaria vesca
gene15029-v1.0-hybrid
I
0.725
Gorai.001G030600
Gossypium raimondii
Gorai.001G030600
I
0.683
Gorai.004G291100
Gossypium raimondii
Gorai.004G291100
I
0.668
Gorai.009G054200
Gossypium raimondii
Gorai.009G054200
I
0.668
Gorai.010G243900
Gossypium raimondii
Gorai.010G243900
I
0.665
Lus10005340.g
Linum usitatissimum
Lus10005340.g
I
0.672
Lus10041020.g
Linum usitatissimum
Lus10041020.g
I
0.672
orange1.1g005465m.g
Citrus sinensis
orange1.1g005465m.g
I
0.672
orange1.1g005719m.g
Citrus sinensis
orange1.1g005719m.g
I
0.710
Pavir.Da02067
Panicum virgatum
Pavir.Da02067
I
0.672
Pavir.Db00644
Panicum virgatum
Pavir.Db00644
I
0.670
Pavir.J08270
Panicum virgatum
Pavir.J08270
I
0.672
Pavir.J35630
Panicum virgatum
Pavir.J35630
I
0.672
SapurV1A.0705s0030
Salix purpurea
SapurV1A.0705s0030
I
0.672
SapurV1A.0730s0060
Salix purpurea
SapurV1A.0730s0060
I
0.672
Thhalv10015296m.g
Eutrema salsugineum
Thhalv10015296m.g
I
0.665
PK02601.1
Cannabis sativa
PK02601.1
I
0.672
PK09202.1
Cannabis sativa
PK09202.1
I
0.744
1200010147
Ostreococcus tauri
1200010147
I
0.678
chr5.CM0345.260.nd
Lotus japonicus
chr5.CM0345.260.nd
I
0.672
chr6.CM0037.920.nc
Lotus japonicus
chr6.CM0037.920.nc
I
0.665
PDK_20s1342911g003
Phoenix dactylifera
PDK_20s1342911g003
I
0.672
PDK_20s1782651g001
Phoenix dactylifera
PDK_20s1782651g001
I
0.672
GLYMA08G05165
Glycine max
GLYMA08G05165
N
0.732
MTR_2g450070
Medicago truncatula
MTR_2g450070
N
0.675
Cla019107
Citrullus lanatus
Cla019107
N
0.669
gw1.49.140.1
Volvox carteri
gw1.49.140.1
N
0.786