CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CDC5L
(
Echinops telfairi
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ENSETEG00000013241
T269542_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.909
1.000
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.814
0.870
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.814
0.870
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000010738
Myb
8
54
GGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWL
ENSETEP00000010738
Myb
60
104
KTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLL
Links
Other
Myb/SANT
family TFs
Other
Echinops telfairi
TFs
575 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF782
Microcebus murinus
ENSMICG00000014905
N
ENSOARG00000008402
Ovis aries
ENSOARG00000008402
N
ZNF782
Procavia capensis
ENSPCAG00000000814
N
ENSP00000275423-D54
Bos grunniens
ENSP00000275423-D54
N