fgenesh2_kg.3__2645__AT3G24310.1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.3__2645__AT3G24310.1 T270772_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.757 0.796
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.727 0.720
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.727 0.720
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.708 0.688
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.708 0.688
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.703 0.720
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.669 0.753
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.666 0.656
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.666 0.656
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.666 0.699
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.664 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__2645__AT3G24310.1 Myb 20 67
fgenesh2_kg.3__2645__AT3G24310.1 Myb 73 118

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

589 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011750 Calypte anna Aan_R011750 N
Afo_R006263 Aptenodytes forsteri Afo_R006263 N
Alligator_sinensis_CCG011535.1 Alligator sinensis Alligator_sinensis_CCG011535.1 N
ENSAMEG00000012706 Ailuropoda melanoleuca ENSAMEG00000012706 N
ENSAPLG00000008722 Anas platyrhynchos ENSAPLG00000008722 N
AEBP2 Bos taurus ENSBTAG00000010818 N
AEBP2 Canis familiaris ENSCAFG00000012441 N
ENSCJAG00000001342 Callithrix jacchus ENSCJAG00000001342 N
AEBP2 Cavia porcellus ENSCPOG00000007440 N
ENSCSAG00000008085 Chlorocebus sabaeus ENSCSAG00000008085 N
AEBP2 Dasypus novemcinctus ENSDNOG00000014519 N
AEBP2 Equus caballus ENSECAG00000012977 N
ENSETEG00000006095 Echinops telfairi ENSETEG00000006095 N
ENSFALG00000001055 Ficedula albicollis ENSFALG00000001055 N
AEBP2 Felis catus ENSFCAG00000031640 N
AEBP2 Homo sapiens ENSG00000139154 N
ENSGALG00000013136 Gallus gallus ENSGALG00000013136 N
AEBP2 Gorilla gorilla ENSGGOG00000002023 N
ENSLACG00000010628 Latimeria chalumnae ENSLACG00000010628 N
AEBP2 Loxodonta africana ENSLAFG00000020685 N
ENSLOCG00000015421 Lepisosteus oculatus ENSLOCG00000015421 N
ENSMEUG00000010574 Macropus eugenii ENSMEUG00000010574 N
ENSMGAG00000013591 Meleagris gallopavo ENSMGAG00000013591 N
AEBP2 Myotis lucifugus ENSMLUG00000006293 N
AEBP2 Macaca mulatta ENSMMUG00000016243 N
ENSMODG00000017867 Monodelphis domestica ENSMODG00000017867 N
ENSMPUG00000011420 Mustela putorius furo ENSMPUG00000011420 N
Aebp2 Mus musculus ENSMUSG00000030232 N
ENSNLEG00000004553 Nomascus leucogenys ENSNLEG00000004553 N
ENSOARG00000020470 Ovis aries ENSOARG00000020470 N
ENSOCUG00000016677 Oryctolagus cuniculus ENSOCUG00000016677 N
AEBP2 Otolemur garnettii ENSOGAG00000017202 N
AEBP2 Ochotona princeps ENSOPRG00000014454 N
ENSP00000381840 Macaca fascicularis ENSP00000381840 N
ENSP00000381840-D1 Bos grunniens ENSP00000381840-D1 N
ENSPANG00000010276 Papio anubis ENSPANG00000010276 N
ENSPPYG00000004345 Pongo abelii ENSPPYG00000004345 N
ENSPSIG00000002184 Pelodiscus sinensis ENSPSIG00000002184 N
AEBP2 Pan troglodytes ENSPTRG00000004747 N
AEBP2 Pteropus vampyrus ENSPVAG00000008104 N
Aebp2 Rattus norvegicus ENSRNOG00000008929 N
ENSSARG00000010983 Sorex araneus ENSSARG00000010983 N
ENSSHAG00000018345 Sarcophilus harrisii ENSSHAG00000018345 N
AEBP2 Sus scrofa ENSSSCG00000000587 N
AEBP2 Taeniopygia guttata ENSTGUG00000012348 N
AEBP2 Tursiops truncatus ENSTTRG00000011776 N
Gfo_R002231 Geospiza fortis Gfo_R002231 N
Myotis_brandtii_PLEKHA5_10031422 Myotis brandtii Myotis_brandtii_PLEKHA5_10031422 N
Tal_R009212 Tyto alba Tal_R009212 N
aebp2.L Xenopus laevis XB-GENE-6251879 N