CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARR12
(
Arabidopsis lyrata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh2_kg.4__435__AT2G25180.1
T270791_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07924.1
M01278_2.00
Cannabis sativa
NGATHYNNN
NNNRDATCN
PBM
Lambert et al.(2019)
pTH11431
0.672
0.787
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4__435__AT2G25180.1
Myb
196
246
RVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFR
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis lyrata
TFs
139 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARR12
Arabidopsis thaliana
AT2G25180
I
0.909
Cagra.2381s0022
Capsella grandiflora
Cagra.2381s0022
I
0.909
Carubv10022837m.g
Capsella rubella
Carubv10022837m.g
I
0.909
Bostr.26326s0153
Boechera stricta
Bostr.26326s0153
N
0.870
Bo4g157430
Brassica oleracea
Bo4g157430
I
0.820
Bra032035
Brassica rapa
Bra032035
I
0.820
Thhalv10000098m.g
Eutrema salsugineum
Thhalv10000098m.g
I
0.804
Eucgr.H04693
Eucalyptus grandis
Eucgr.H04693
I
0.761
Lus10006446.g
Linum usitatissimum
Lus10006446.g
I
0.761
Lus10011389.g
Linum usitatissimum
Lus10011389.g
I
0.761
Eucgr.H04694
Eucalyptus grandis
Eucgr.H04694
I
0.748
Eucgr.C04050
Eucalyptus grandis
Eucgr.C04050
I
0.737
VIT_11s0206g00060
Vitis vinifera
VIT_11s0206g00060
I
0.688
Eucgr.C00380
Eucalyptus grandis
Eucgr.C00380
I
0.688
evm.TU.supercontig_46.117
Carica papaya
evm.TU.supercontig_46.117
I
0.688
Gorai.009G054200
Gossypium raimondii
Gorai.009G054200
I
0.688
Gorai.009G061000
Gossypium raimondii
Gorai.009G061000
I
0.687
Cucsa.350850
Cucumis sativus
Cucsa.350850
I
0.686
VIT_17s0000g10110
Vitis vinifera
VIT_17s0000g10110
N
0.685
GLYMA04G06650
Glycine max
GLYMA04G06650
I
0.684
GLYMA06G06730
Glycine max
GLYMA06G06730
I
0.684
GLYMA14G13320
Glycine max
GLYMA14G13320
I
0.684
VIT_04s0008g05900
Vitis vinifera
VIT_04s0008g05900
I
0.684
Cla021325
Citrullus lanatus
Cla021325
I
0.684
29848.m004559
Ricinus communis
29848.m004559
I
0.684
cassava18404.valid.m1
Manihot esculenta
cassava18404.valid.m1
I
0.684
cassava18405.valid.m1
Manihot esculenta
cassava18405.valid.m1
I
0.684
cassava8114.valid.m1
Manihot esculenta
cassava8114.valid.m1
I
0.684
Cucsa.271670
Cucumis sativus
Cucsa.271670
I
0.684
Ciclev10007639m.g
Citrus clementina
Ciclev10007639m.g
I
0.684
orange1.1g005465m.g
Citrus sinensis
orange1.1g005465m.g
I
0.684
SapurV1A.0730s0060
Salix purpurea
SapurV1A.0730s0060
I
0.684
PDK_20s1342911g003
Phoenix dactylifera
PDK_20s1342911g003
I
0.684
PDK_20s1782651g001
Phoenix dactylifera
PDK_20s1782651g001
I
0.684
Gorai.010G243900
Gossypium raimondii
Gorai.010G243900
I
0.683
POPTR_0006s20220
Populus trichocarpa
POPTR_0006s20220
I
0.679
POPTR_0018s11960
Populus trichocarpa
POPTR_0018s11960
I
0.679
SapurV1A.0100s0230
Salix purpurea
SapurV1A.0100s0230
I
0.679
SapurV1A.0347s0250
Salix purpurea
SapurV1A.0347s0250
I
0.679
RR23
Oryza indica
BGIOSGA005436
I
0.675
RR22
Oryza indica
BGIOSGA022430
I
0.675
F775_19079
Aegilops tauschii
F775_19079
I
0.675
LPERR06G04900
Leersia perrieri
LPERR06G04900
I
0.675
MLOC_61880
Hordeum vulgare
MLOC_61880
I
0.675
OB02G42700
Oryza brachyantha
OB02G42700
I
0.675
OB06G14930
Oryza brachyantha
OB06G14930
I
0.675
OBART06G05360
Oryza barthii
OBART06G05360
I
0.675
OGLUM06G05540
Oryza glumaepatula
OGLUM06G05540
I
0.675
OMERI06G06380
Oryza meridionalis
OMERI06G06380
I
0.675
ONIVA06G06160
Oryza nivara
ONIVA06G06160
I
0.675
OPUNC06G05150
Oryza punctata
OPUNC06G05150
I
0.675
ORGLA02G0311700
Oryza glaberrima
ORGLA02G0311700
I
0.675
ORGLA06G0048800
Oryza glaberrima
ORGLA06G0048800
I
0.675
ORUFI06G05490
Oryza rufipogon
ORUFI06G05490
I
0.675
RR23
Oryza sativa
OS02G0796500
I
0.675
RR22
Oryza sativa
OS06G0183100
I
0.675
Sb10g005580
Sorghum bicolor
Sb10g005580
I
0.675
Si006013m.g
Setaria italica
Si006013m.g
I
0.675
Si016546m.g
Setaria italica
Si016546m.g
I
0.675
TCM_036926
Theobroma cacao
TCM_036926
I
0.675
Traes_7AS_DECB8080D
Triticum aestivum
Traes_7AS_DECB8080D
I
0.675
Traes_7DS_22DE624A5
Triticum aestivum
Traes_7DS_22DE624A5
I
0.675
TRIUR3_26858
Triticum urartu
TRIUR3_26858
I
0.675
TRIUR3_28229
Triticum urartu
TRIUR3_28229
I
0.675
Pavir.Da02067
Panicum virgatum
Pavir.Da02067
I
0.675
Pavir.J08270
Panicum virgatum
Pavir.J08270
I
0.675
Pavir.J35630
Panicum virgatum
Pavir.J35630
I
0.675
BGIOSGA000304
Oryza indica
BGIOSGA000304
I
0.672
F775_27736
Aegilops tauschii
F775_27736
I
0.672
GLYMA05G27670
Glycine max
GLYMA05G27670
I
0.672
GLYMA08G10650
Glycine max
GLYMA08G10650
I
0.672
GLYMA09G14650
Glycine max
GLYMA09G14650
I
0.672
GLYMA11G37480
Glycine max
GLYMA11G37480
I
0.672
GLYMA15G24770
Glycine max
GLYMA15G24770
I
0.672
GLYMA18G01434
Glycine max
GLYMA18G01434
I
0.672
GRMZM2G100318
Zea mays
GRMZM2G100318
I
0.672
GRMZM2G177220
Zea mays
GRMZM2G177220
I
0.672
GSMUA_Achr3G14630_001
Musa acuminata
GSMUA_Achr3G14630_001
I
0.672
LPERR01G35510
Leersia perrieri
LPERR01G35510
I
0.672
MLOC_23250
Hordeum vulgare
MLOC_23250
I
0.672
MTR_8g079940
Medicago truncatula
MTR_8g079940
I
0.672
OB01G49660
Oryza brachyantha
OB01G49660
I
0.672
OBART01G40940
Oryza barthii
OBART01G40940
I
0.672
OGLUM01G45120
Oryza glumaepatula
OGLUM01G45120
I
0.672
OLONG_004141
Oryza longistaminata
OLONG_004141
I
0.672
OMERI01G37950
Oryza meridionalis
OMERI01G37950
I
0.672
ONIVA01G45980
Oryza nivara
ONIVA01G45980
I
0.672
OPUNC01G39740
Oryza punctata
OPUNC01G39740
I
0.672
ORGLA01G0348700
Oryza glaberrima
ORGLA01G0348700
I
0.672
ORUFI01G44260
Oryza rufipogon
ORUFI01G44260
I
0.672
RR26
Oryza sativa
OS01G0904700
I
0.672
POPTR_0010s06290
Populus trichocarpa
POPTR_0010s06290
I
0.672
PRUPE_ppa002679mg
Prunus persica
PRUPE_ppa002679mg
I
0.672
Si000815m.g
Setaria italica
Si000815m.g
I
0.672
TCM_010701
Theobroma cacao
TCM_010701
I
0.672
TCM_037098
Theobroma cacao
TCM_037098
I
0.672
Traes_3AL_9D2735F60
Triticum aestivum
Traes_3AL_9D2735F60
I
0.672
Traes_3B_D9F27151E
Triticum aestivum
Traes_3B_D9F27151E
I
0.672
TRAES3BF094200030CFD_g
Triticum aestivum
TRAES3BF094200030CFD_g
I
0.672
TRAES3BF107400040CFD_g
Triticum aestivum
TRAES3BF107400040CFD_g
I
0.672
Traes_3DL_D82CA7827
Triticum aestivum
Traes_3DL_D82CA7827
I
0.672
ARR11
Vitis vinifera
VIT_01s0010g02230
I
0.672
Cla023064
Citrullus lanatus
Cla023064
I
0.672
Pm006838
Prunus mume
Pm006838
I
0.672
29737.m001227
Ricinus communis
29737.m001227
I
0.672
29929.m004752
Ricinus communis
29929.m004752
I
0.672
cassava13981.valid.m1
Manihot esculenta
cassava13981.valid.m1
I
0.672
cassava262.valid.m1
Manihot esculenta
cassava262.valid.m1
I
0.672
cassava29171.valid.m1
Manihot esculenta
cassava29171.valid.m1
I
0.672
Cucsa.394720
Cucumis sativus
Cucsa.394720
I
0.672
Aquca_016_00168
Aquilegia coerulea
Aquca_016_00168
I
0.672
evm.TU.supercontig_86.17
Carica papaya
evm.TU.supercontig_86.17
I
0.672
Gorai.004G291100
Gossypium raimondii
Gorai.004G291100
I
0.672
Gorai.005G173300
Gossypium raimondii
Gorai.005G173300
I
0.672
MDP0000320381
Malus domestica
MDP0000320381
I
0.672
Pavir.Ea03527
Panicum virgatum
Pavir.Ea03527
I
0.672
Pavir.J23046
Panicum virgatum
Pavir.J23046
I
0.672
SapurV1A.0152s0010
Salix purpurea
SapurV1A.0152s0010
I
0.672
SapurV1A.0629s0180
Salix purpurea
SapurV1A.0629s0180
I
0.672
PK07924.1
Cannabis sativa
PK07924.1
D
0.672
chr6.CM0037.920.nc
Lotus japonicus
chr6.CM0037.920.nc
I
0.672
LjSGA_022114.1
Lotus japonicus
LjSGA_022114.1
I
0.672
PDK_20s1362511g001
Phoenix dactylifera
PDK_20s1362511g001
I
0.672
PGSC0003DMG400007823
Solanum tuberosum
PGSC0003DMG400007823
I
0.671
Solyc12g010330.1
Solanum lycopersicum
Solyc12g010330.1
I
0.671
MTR_3g086100
Medicago truncatula
MTR_3g086100
I
0.670
GRMZM2G479110
Zea mays
GRMZM2G479110
I
0.664
Sb04g035980
Sorghum bicolor
Sb04g035980
I
0.664
RR24
Oryza indica
BGIOSGA007015
I
0.663
LPERR02G05460
Leersia perrieri
LPERR02G05460
I
0.663
OB02G15530
Oryza brachyantha
OB02G15530
I
0.663
OBART02G06200
Oryza barthii
OBART02G06200
I
0.663
OGLUM02G06200
Oryza glumaepatula
OGLUM02G06200
I
0.663
OLONG_007266
Oryza longistaminata
OLONG_007266
I
0.663
OMERI02G07120
Oryza meridionalis
OMERI02G07120
I
0.663
ONIVA02G07230
Oryza nivara
ONIVA02G07230
I
0.663
ORGLA02G0057500
Oryza glaberrima
ORGLA02G0057500
I
0.663
ORUFI02G06340
Oryza rufipogon
ORUFI02G06340
I
0.663
RR24
Oryza sativa
OS02G0182100
I
0.663