MYB109 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.5__1999__AT3G55730.1 T270800_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.772 0.828
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.712 0.785
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.676 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.5__1999__AT3G55730.1 Myb 52 98
fgenesh2_kg.5__1999__AT3G55730.1 Myb 104 149

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTERF2 Procavia capensis ENSPCAG00000008234 N
Myotis_brandtii_Cry1_10020414 Myotis brandtii Myotis_brandtii_Cry1_10020414 N
ENSP00000240050-D1 Bos grunniens ENSP00000240050-D1 N
MTERF2 Vicugna pacos ENSVPAG00000008539 N
MTERF2 Tursiops truncatus ENSTTRG00000012809 N
ENSTSYG00000010530 Tarsius syrichta ENSTSYG00000010530 N
ENSSTOG00000010181 Ictidomys tridecemlineatus ENSSTOG00000010181 N
Mterf2 Rattus norvegicus ENSRNOG00000006978 N
MTERF2 Pan troglodytes ENSPTRG00000005395 N
ENSPPYG00000004910 Pongo abelii ENSPPYG00000004910 N
MTERF2 Bos taurus ENSBTAG00000010144 N
ENSNLEG00000006719 Nomascus leucogenys ENSNLEG00000006719 N
Mterf2 Mus musculus ENSMUSG00000049038 N
MTERF2 Monodelphis domestica ENSMODG00000001589 N
ENSMEUG00000013008 Macropus eugenii ENSMEUG00000013008 N
MTERF2 Gorilla gorilla ENSGGOG00000025492 N
MTERF2 Homo sapiens ENSG00000120832 N
Mterf2 Dipodomys ordii ENSDORG00000004167 N
MTERF2 Callithrix jacchus ENSCJAG00000015094 N