GLYMA17G36370 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA17G36370 T271721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.670 0.753
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.670 0.753
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.670 0.753
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.669 0.742
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.665 0.742
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.665 0.731
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.665 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G36370.2 Myb 74 120
GLYMA17G36370.2 Myb 126 171

Links

Other Myb/SANT family TFs
Other Glycine max TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.806
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.792
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.792
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.792
30170.m013927 Ricinus communis 30170.m013927 I 0.783
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.783
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.783
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.783
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.775
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.772
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.768
Pm005220 Prunus mume Pm005220 I 0.768
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.768
MDP0000894463 Malus domestica MDP0000894463 I 0.768
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.762
Ca_01522 Cicer arietinum Ca_01522 I 0.759
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.758
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.757
Cla021015 Citrullus lanatus Cla021015 I 0.751
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I 0.751
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.750
Cla022889 Citrullus lanatus Cla022889 I 0.748
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.748
TCM_033907 Theobroma cacao TCM_033907 I 0.744
MDP0000477900 Malus domestica MDP0000477900 I 0.741
MDP0000480596 Malus domestica MDP0000480596 I 0.741
MDP0000641708 Malus domestica MDP0000641708 I 0.741
MDP0000784297 Malus domestica MDP0000784297 I 0.741
MDP0000823270 Malus domestica MDP0000823270 I 0.741
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.739
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.726
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.725
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.723
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.718
MTR_3g101290 Medicago truncatula MTR_3g101290 I 0.715
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.705
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.705
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.700
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.700
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.700
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.700
PK29071.1 Cannabis sativa PK29071.1 I 0.700
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.699
mgf006151m Mimulus guttatus mgf006151m I 0.695
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.694
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.694
mgf003084m Mimulus guttatus mgf003084m I 0.693
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.693
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.693
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.692
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.691
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.689
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.689
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.689
TCM_042474 Theobroma cacao TCM_042474 I 0.689
30170.m013698 Ricinus communis 30170.m013698 I 0.689
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.689
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.689
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.689
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.689
PK17282.1 Cannabis sativa PK17282.1 I 0.689
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.686
TCM_007138 Theobroma cacao TCM_007138 I 0.684
mgf023922m Mimulus guttatus mgf023922m I 0.684
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.683
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.682
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.680
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.680
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.680
Cla020946 Citrullus lanatus Cla020946 I 0.680
Pm005332 Prunus mume Pm005332 I 0.680
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.680
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.680
MDP0000463846 Malus domestica MDP0000463846 I 0.680
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.680
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.680
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.680
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.679
29814.m000736 Ricinus communis 29814.m000736 I 0.679
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.679
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.678
Bo4g151410 Brassica oleracea Bo4g151410 I 0.677
Bra032176 Brassica rapa Bra032176 I 0.677
MDP0000275800 Malus domestica MDP0000275800 I 0.676
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.675
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.674
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.674
TCM_000696 Theobroma cacao TCM_000696 I 0.674
29970.m000987 Ricinus communis 29970.m000987 I 0.674
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.674
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.674
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.674
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.674
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.674
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.674
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.674
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.674
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.674
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.673
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I 0.672
MYB44 Arabidopsis thaliana AT5G67300 D 0.670
Bo7g063830 Brassica oleracea Bo7g063830 I 0.670
Bra012149 Brassica rapa Bra012149 I 0.670
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.670
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.670
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.670
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.670
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.670
MYB73 Arabidopsis thaliana AT4G37260 D 0.669
Bo1g004900 Brassica oleracea Bo1g004900 I 0.669
Bo3g153550 Brassica oleracea Bo3g153550 I 0.669
Bra011749 Brassica rapa Bra011749 I 0.669
CHLREDRAFT_116056 Chlamydomonas reinhardtii CHLREDRAFT_116056 I 0.669
gw1.18.142.1 Volvox carteri gw1.18.142.1 I 0.669
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.669
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.669
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.669
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.669
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.668
evm.TU.supercontig_56.79 Carica papaya evm.TU.supercontig_56.79 I 0.667
Bo8g090160 Brassica oleracea Bo8g090160 I 0.666
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I 0.666
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I 0.666
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.665
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.665
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.665
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.665
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.665
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.665
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.665
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I 0.665
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.665
Ca_02182 Cicer arietinum Ca_02182 I 0.665
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.665
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.665
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.665
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.665
Lus10010260.g Linum usitatissimum Lus10010260.g I 0.665
Lus10030336.g Linum usitatissimum Lus10030336.g I 0.665
MDP0000196986 Malus domestica MDP0000196986 I 0.665
MDP0000232454 Malus domestica MDP0000232454 I 0.665
PK28565.1 Cannabis sativa PK28565.1 D 0.665
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.665
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.665
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I 0.664
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.663
Cla004431 Citrullus lanatus Cla004431 I 0.662
Cla014191 Citrullus lanatus Cla014191 I 0.662
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.662
Bo2g167960 Brassica oleracea Bo2g167960 I 0.661
Bo7g118450 Brassica oleracea Bo7g118450 I 0.661
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.661